Protein

View in Explore
Genbank accession
WYW01992.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,70
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MANNLLKFIPKALVGWFKDGEHADGSIQEPPVPTEGVLNRPLYSLYQSTEMLQQAMGAYLTLLQTNGSDNNTLLFANGMYQHQALLNPVTMLLPTDKQIPNQSDATKRTALVVGDAVRVQVTGGTIGTYPVTISGNGVAVGGLPNFVMATPYADYRFIWNGASWDVQLAVGQMGVGGFGNSRVAVAIATALPVNNGEMLWVNNTNSIAAPSVALPQGRVGDLVFVGDYSANSNLYPIKITAAAGQAFEGIVTGSDYIQSINGVRGYQYVNATTGWRVVDDATHAGFVKTAAQRGAGLTYLGQVGQPSANVLTYSIPTAGAFGQAFTSYAAGQRFQLKVATANTGAATLNLNSLGAKAITSNGTDALTGGELSVGKVHDVFYDGASFQLVSSTRVDLTAYAPINSPTFTGDPKAPTPPLTDNDNSVATTAFVKLAIAALIDSSPGALDTLNELAAALGDDPNFATTMNNLIATKATIDSPTFTGDPKAPTAAAGDIDTSVANTAFVRAAMALFGIGTPNAANVTDLNAVGAGGFYYNSSTTATGVPIASNGLMIHTPFGDGSAALQIWASPLNPTRIFWRVRASNSWGGWKEFAALDSPVFTGDPKAPTPVTTDNDTSVATTNFVRNVLARYGIGTSDMDDTVADVGTLTEGGTYQVSSTITINGVNYLSGVVIVATNALYYTQQIFMPQANNRMFQRVSNGQVNSVTQWSQWREIASLDSPTFTGDPKAPTASLADNDLSIANTAFVQGLMGASGLGGSAISGDTLNFNDAPLNSFVKAEGTETNSTTYNRPLLGVAGTTAVAFTLITIGVPGAFRVTQYASSIFPSGRNRTFTRVKHDGAWFPWKELATTDSPVFTGDPQAPTAALGDTDLTIANTAFVQNQLAAWGLGTLVSNIVTGNDMNQAVLGGLYRAQSTTANIPISSNFSVIVVPYNGGGCLQIATALNSNNRMFWRSQAGGNWTAWNEAVATDSPSLIGTPTAPTPPTTDNSTRLANTAYAQNLNFSQSRKFKGVGVGVSASITLDVSHSGYWLNLAGSGITVTLPDPTTLLPGATFVFRNPTSTVQTIVAPSGATISDSGSVQQITMQPLETLELATSGTSYWIVDRGSIVAPQDMIGQFTGVQTFTASGSWLCPAGVTTVYLSGCGGGGGGAGGGGASDSGSGGGSGGGCGTYAVLTPITVVPGSTYTITIGGGGAGGNGGPALAQGVVGSEAGAGLQGGNGSATTFKLGSTTLLTLGGGTRGSVGGTASGAGGISLVPGVTDGQDAPGLYLGGAGGAGAGTPWGTGGGGGRQANGPGSNGSASIGYGAGGGGGGGAYTRQNYANVSAAKGGNGSAGKAGVIFLQW
Physico‐chemical
properties
protein length:1346 AA
molecular weight: 136796,52810 Da
isoelectric point:4,92671
aromaticity:0,08098
hydropathy:0,02838

Domains

Domains [InterPro]
DC_1788
STR
219–708
DC_1788 DC_0678
IPR051934
Unmapped
397–474
IPR051934 cd19958 cd19958 cd19958
DC_0465
STR
671–834
DC_0465
WYW01992.1
1 1346
Architecture
STR
STR
STR 219-834 | STR 846-1145 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PpuM-Pori-4
[NCBI] 		3132645 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas putida KT2440 and
[NCBI] 		1481724 Heterolobosea > Eutetramitea > Lyromonadida > Psalteriomonadidae > Monopylocystis >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYW01992.1 [NCBI]
Genbank nucleotide accession
PP496441.1 [NCBI]
CDS location
range 93254 -> 97294
strand -
CDS
ATGGCTAATAACTTACTCAAATTCATTCCAAAGGCACTGGTCGGCTGGTTTAAAGACGGCGAGCATGCTGACGGTTCGATTCAAGAACCGCCCGTACCCACGGAAGGTGTGCTGAACAGGCCGCTGTATAGCTTGTACCAAAGCACCGAGATGTTGCAGCAAGCCATGGGTGCCTATCTGACACTGCTTCAGACCAACGGCTCGGACAACAACACCCTGTTGTTCGCCAACGGCATGTACCAGCATCAGGCTTTGCTCAACCCTGTAACCATGCTGCTACCTACTGACAAGCAGATTCCTAACCAGTCTGATGCCACCAAGCGTACTGCTCTGGTCGTCGGCGATGCGGTCCGTGTGCAGGTAACCGGGGGCACCATCGGTACGTATCCGGTGACCATCTCGGGTAACGGCGTCGCTGTCGGCGGTCTGCCGAACTTCGTAATGGCAACCCCCTACGCAGACTACCGGTTCATCTGGAACGGTGCATCGTGGGACGTTCAACTGGCTGTAGGTCAGATGGGTGTCGGCGGCTTCGGTAACAGCCGGGTCGCGGTAGCTATCGCCACGGCCTTGCCCGTCAACAACGGCGAGATGTTGTGGGTCAACAACACCAACAGTATTGCCGCACCTTCGGTAGCCCTGCCACAAGGCCGGGTTGGTGACCTGGTGTTTGTTGGCGACTACTCGGCCAACTCCAACCTGTATCCGATCAAGATCACAGCGGCAGCGGGCCAAGCGTTCGAAGGCATTGTGACTGGATCTGACTACATCCAATCGATCAATGGGGTGCGAGGCTATCAGTACGTCAACGCCACGACTGGCTGGCGTGTGGTAGACGATGCCACTCACGCGGGCTTCGTCAAGACTGCGGCTCAACGCGGTGCCGGACTCACTTACCTCGGTCAGGTAGGTCAGCCGAGTGCCAACGTACTGACCTACAGCATCCCGACAGCGGGTGCATTCGGGCAAGCGTTCACCAGCTACGCAGCAGGCCAGCGCTTTCAGCTCAAGGTTGCTACTGCCAACACCGGTGCAGCTACCCTGAACCTGAACAGTTTGGGCGCCAAGGCAATTACGTCCAATGGTACGGATGCCCTCACAGGCGGCGAGCTGTCGGTAGGTAAGGTGCATGACGTGTTCTACGACGGGGCGAGCTTCCAACTCGTAAGCAGTACCCGAGTTGACCTGACGGCGTACGCACCGATCAACAGTCCGACGTTCACTGGTGATCCCAAGGCACCAACTCCGCCGCTTACAGATAATGACAACTCGGTTGCTACCACGGCCTTCGTGAAGCTGGCGATTGCTGCGCTGATCGACTCTTCGCCGGGAGCATTGGACACCTTGAACGAACTGGCTGCGGCACTGGGAGACGATCCCAACTTCGCAACCACGATGAACAACCTGATTGCTACCAAGGCGACGATTGACTCGCCGACGTTCACGGGCGACCCCAAGGCCCCGACGGCAGCGGCAGGTGACATAGATACCTCGGTGGCAAACACTGCGTTCGTAAGAGCAGCAATGGCCCTGTTCGGTATCGGTACGCCGAATGCTGCGAACGTCACAGACCTTAACGCCGTGGGTGCAGGTGGTTTCTACTACAACTCCTCTACCACTGCCACCGGTGTTCCGATTGCGTCTAACGGCCTGATGATCCATACCCCGTTTGGGGATGGCAGCGCCGCGTTGCAGATCTGGGCATCACCGTTGAACCCTACCCGCATCTTCTGGCGTGTTCGTGCGTCGAATTCGTGGGGTGGGTGGAAAGAGTTCGCAGCGCTGGACTCCCCGGTCTTCACTGGGGATCCTAAGGCTCCTACGCCGGTAACCACGGATAACGATACCTCGGTTGCTACCACGAACTTCGTCCGAAATGTCTTGGCGCGGTACGGTATTGGTACGTCAGACATGGACGATACTGTTGCCGACGTTGGTACGCTAACCGAGGGTGGTACGTATCAGGTTAGTTCGACTATCACGATCAACGGCGTGAACTATCTGTCCGGCGTTGTGATTGTTGCCACTAACGCTCTGTATTACACCCAGCAGATTTTCATGCCGCAGGCTAACAACCGCATGTTCCAGCGGGTGTCCAACGGGCAGGTAAACAGCGTTACTCAATGGTCGCAATGGCGTGAAATTGCAAGCCTGGATTCGCCGACGTTCACTGGCGATCCAAAGGCTCCTACAGCATCGTTGGCAGACAACGACCTGAGTATTGCCAACACCGCTTTCGTGCAAGGTTTGATGGGTGCATCTGGGTTGGGTGGTTCCGCGATCAGCGGCGACACTCTGAACTTCAACGACGCCCCGTTGAACTCCTTCGTTAAGGCCGAAGGTACGGAAACCAACTCGACTACCTACAACCGTCCACTCTTGGGTGTTGCGGGTACGACAGCAGTAGCCTTCACCCTGATCACCATTGGTGTACCTGGGGCGTTTCGAGTAACGCAGTACGCCAGCTCGATCTTCCCGTCGGGCCGCAACCGTACCTTCACGCGGGTCAAGCATGATGGTGCCTGGTTCCCATGGAAAGAACTGGCTACTACAGATTCTCCGGTATTCACTGGTGACCCGCAGGCCCCTACAGCTGCGCTGGGTGATACCGACCTGACCATCGCTAACACCGCGTTCGTTCAGAACCAGTTGGCAGCATGGGGCCTGGGCACGCTGGTCAGCAACATCGTCACCGGCAACGACATGAACCAGGCTGTATTGGGTGGCTTGTACCGCGCTCAGTCTACCACGGCCAACATTCCGATCTCGTCTAACTTCTCAGTCATCGTGGTACCTTACAACGGTGGGGGTTGCCTACAGATTGCTACTGCTCTTAACTCCAACAACAGGATGTTCTGGCGGAGTCAGGCAGGTGGAAACTGGACTGCGTGGAACGAGGCGGTAGCCACTGACTCGCCTTCATTAATCGGAACTCCGACCGCACCTACACCACCTACCACGGACAACAGCACTCGTCTGGCTAACACGGCCTATGCACAGAACTTGAACTTCTCGCAGTCGCGTAAGTTTAAAGGTGTCGGTGTCGGGGTATCCGCTAGCATCACGTTGGACGTCTCGCATTCCGGCTACTGGTTGAACCTGGCGGGTAGTGGTATCACAGTAACGCTCCCCGATCCTACCACGTTGCTTCCGGGTGCAACCTTCGTGTTCCGCAACCCGACTTCCACGGTTCAGACGATTGTAGCTCCGTCCGGTGCAACCATCAGTGACTCTGGTTCGGTGCAGCAGATCACCATGCAACCACTGGAGACATTGGAGCTGGCAACAAGTGGCACCTCCTACTGGATCGTTGACCGGGGTTCGATCGTAGCGCCGCAAGACATGATCGGGCAATTCACCGGCGTTCAGACGTTTACTGCTAGTGGCTCTTGGTTGTGTCCAGCAGGTGTGACCACTGTTTACCTTTCGGGTTGCGGTGGCGGTGGCGGTGGTGCGGGGGGCGGTGGCGCCTCAGACAGTGGCTCAGGTGGGGGTTCGGGTGGTGGTTGTGGTACGTATGCAGTTCTTACTCCGATCACGGTAGTACCGGGAAGCACCTATACCATTACCATCGGTGGCGGTGGCGCAGGCGGTAATGGTGGCCCGGCTTTGGCCCAAGGTGTGGTAGGTAGTGAGGCGGGTGCAGGTCTGCAAGGGGGTAACGGTAGTGCTACCACGTTCAAACTCGGATCTACCACACTTCTTACCCTAGGTGGAGGTACACGTGGTTCAGTAGGTGGCACCGCTTCGGGCGCAGGCGGTATTAGCCTTGTTCCCGGTGTTACCGACGGACAAGACGCCCCCGGCTTGTATCTGGGCGGCGCGGGCGGTGCAGGTGCAGGTACTCCTTGGGGTACGGGCGGTGGTGGTGGTCGTCAGGCCAACGGTCCGGGTAGCAACGGGTCAGCCTCGATTGGTTACGGTGCAGGTGGCGGTGGCGGTGGCGGTGCGTATACTCGCCAGAACTACGCCAACGTCAGCGCGGCAAAAGGCGGGAACGGCAGCGCGGGTAAAGCAGGCGTAATCTTCCTCCAGTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a23e1b675d3cbd8f69113ebafa03beeb9f499f4e192b0d7c4959ea13e894d6f6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6487
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a phage collection against Pseudomonas putida Brauer,A., Rosendahl,S., Kangsep,A., Rikberg,R., Lewanczyk,A.C., Horak,R. and Tamman,H. — — GenBank