Protein

View in Explore
Genbank accession
YP_009609871.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MANPIFIPIAFAANGIKNPIQKVRQVGQDPEDFTWNEGAPLITMTKIEDGGKAPKGQDVNGVLNALSEHVIYGQNGNRYTWSQDVVDEFGGYALGAIIQSNDTTKEFRSLVANNTVNPNNGLGGVWEVYSGQGSIPAATSTTAGITKVLNVLNSNDVGSALSAAQGKVLNDNMNNFLNKFSSSLIANNGSFSIPLGSGTTIIIKYGSTSVNGDSNATVNFTTAFPSLCLNAQATLNSVSFDSLADAGCGVTWTRTGLTLRNGTANTLNISWLAIGY
Physico‐chemical
properties
protein length:276 AA
molecular weight: 28949,88270 Da
isoelectric point:4,94456
aromaticity:0,07971
hydropathy:-0,08297

Domains

Domains [InterPro]
DC_0979
STR
40–276
DC_0979
IPR054500
STR
148–180
IPR054500 G3DSA:2.60.40.3940
IPR054075
RBD
201–276
IPR054075
YP_009609871.1
1 276
Architecture
STR
STR 40-276
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage AbP2
[NCBI] 		2015804 Uroviricota > Caudoviricetes > Obolenskvirus >
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009609871.1 [NCBI]
Genbank nucleotide accession
NC_041998.1 [NCBI]
CDS location
range 9379 -> 10209
strand -
CDS
GTGGCTAATCCTATATTTATCCCGATAGCATTTGCTGCTAACGGAATTAAGAACCCTATTCAAAAGGTTCGGCAAGTCGGGCAAGATCCGGAGGATTTTACGTGGAATGAGGGTGCACCCCTAATTACCATGACAAAAATCGAAGATGGCGGCAAGGCTCCAAAAGGTCAGGACGTGAATGGCGTTCTTAATGCTTTATCTGAGCATGTTATCTACGGGCAAAATGGCAACCGTTATACGTGGTCGCAAGATGTTGTGGATGAATTTGGCGGCTATGCACTGGGCGCAATTATTCAATCCAATGACACCACAAAAGAATTTAGAAGCCTTGTAGCTAACAACACAGTAAACCCGAACAATGGGCTTGGTGGGGTTTGGGAGGTTTATAGTGGGCAAGGAAGCATCCCGGCTGCAACAAGTACAACCGCAGGCATCACGAAGGTTCTAAATGTCTTAAATAGTAATGATGTTGGATCTGCTTTGAGTGCTGCGCAAGGTAAAGTATTAAATGACAACATGAATAACTTTTTAAATAAGTTTTCATCAAGTCTAATTGCAAATAATGGTAGCTTTTCTATTCCATTAGGTAGTGGAACTACAATCATTATTAAGTATGGCTCTACTTCTGTTAACGGTGACTCAAACGCTACTGTAAATTTTACAACCGCATTTCCAAGCTTATGCCTAAATGCTCAAGCTACATTAAATAGCGTGTCATTTGACTCATTGGCTGATGCTGGTTGTGGTGTAACTTGGACAAGAACTGGCTTAACTTTGCGAAATGGCACAGCTAACACACTAAATATTTCATGGCTTGCAATAGGATACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f84b52421726800e73a2d1f9efe8a2cd5b61d0908b6e850d543e555c453d5a7d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8659
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Acinetobacter baumannii phage AbP2 Yang,Z., Yin,S., Jiang,B., Huang,G. and Peng,Y. 2012-10 — GenBank