Protein

View in Explore
Genbank accession
QLF82390.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,83
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MALYRRGTASMDADGTVHGTDTKWKDQLALIRVGATIVFLEQPIKLAVISDIVSDTELKAISTDGQTASDGKYVILLNDSLTVNGLAQNVAETLRYYQSKETEIAGAMDIIASLDMDNLNRIVEEIKANKSAAESAQNQAELARDSANAARDEAKATKGQVQQIVDGAVGSINAAKEQAITDVGSKESAAITHIDTEEKAAIKAINDAKGDLSGYVNNAQAAAQTATSAKNDAQAARDDAVSAKDAASVSAQEAKDAANSINADNLLTKDGNLSGLTNKSVARTNLDIDKFGLGLQSSAGLVNSLSEGNSVNLANGFYVGEGGNFGKPFGIGDGQFLGVVTFNCTKGNNYKFQLSGSYSSSGRMMFRCMNNGNYGAWKEVLTSASPSVEYGITIKRSDQGRPNQSGYIGVGGNDVYFKNGTSNRALQLRDDSSVAYDGRVIIDSDKTMVIGAGKDINQPNIGAWIKGMRDTGGSRVMRNTGAASAGGANFQHNAAIYMLAGDTFGLLSVDYRNANVYSIGANNSGLNSGVVQVNALWGTKNTTVDGNGFIKRASPIVRVKRDSFETNDESEGCTVQRIGVGEYLIEGCTGLNSDLAWGGISGGIEIPVDINKQPLLWVDYEVNADGSIILKTFHRTHESAPKFARNDKEGYSNGDPIDIPNDVFVSIRVEMPPNSIYNTELERMEREVRNGAKRSEWEEAHATGCKEE
Physico‐chemical
properties
protein length:708 AA
molecular weight: 75348,59020 Da
isoelectric point:5,01032
aromaticity:0,06215
hydropathy:-0,38602

Domains

Domains [InterPro]
DC_0906
STR
1–707
DC_0906
Coil
Unmapped
116–153
Coil IPR058008
QLF82390.1
1 708
Architecture
STR
STR 1-707 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QLF82390.1
1 708
Domain Start End Length (AA) Confidence
N-terminal 1 690 690 0,4103
Central domain 691 697 8 0,6959
C-terminal 698 708 10 0,7080
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-690
Central
691-697
C-terminal
698-708

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_Chapo
[NCBI] 		2750856 Uroviricota > Caudoviricetes > Drexlerviridae > Tunavirus > Tunavirus chapo
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QLF82390.1 [NCBI]
Genbank nucleotide accession
MT682715.1 [NCBI]
CDS location
range 33569 -> 35695
strand -
CDS
ATGGCTTTATACAGACGCGGTACGGCATCAATGGATGCAGACGGAACGGTTCACGGAACCGATACAAAATGGAAAGATCAGCTTGCTCTTATTCGCGTAGGTGCAACTATCGTGTTCCTTGAGCAACCAATTAAGCTGGCGGTGATTAGCGATATCGTTAGCGACACAGAATTAAAGGCTATCTCTACCGACGGTCAGACTGCCTCTGACGGTAAGTATGTGATCTTGCTTAACGATTCACTGACTGTTAACGGATTGGCTCAAAACGTCGCTGAGACGCTTCGATACTATCAAAGCAAAGAGACTGAGATTGCCGGGGCAATGGATATCATTGCGAGTCTGGATATGGATAACCTTAACCGCATCGTTGAAGAAATTAAGGCGAACAAATCAGCCGCTGAATCTGCACAGAATCAAGCGGAACTTGCTCGCGACTCAGCGAATGCAGCACGTGACGAAGCTAAAGCCACCAAAGGCCAAGTTCAGCAAATTGTTGACGGGGCTGTCGGTAGCATCAATGCAGCAAAAGAACAAGCGATCACAGATGTAGGCTCTAAAGAATCAGCGGCGATTACGCACATCGACACGGAAGAGAAAGCAGCCATTAAAGCAATCAATGACGCCAAAGGAGATCTGTCAGGTTACGTTAACAACGCCCAGGCGGCGGCGCAAACTGCAACCTCAGCAAAAAACGACGCACAGGCGGCTCGTGACGATGCTGTTAGTGCAAAAGATGCGGCATCGGTTAGCGCTCAGGAAGCAAAGGACGCAGCTAATAGCATTAACGCTGACAACCTGTTAACGAAGGATGGTAATCTTAGTGGATTGACAAACAAAAGCGTTGCAAGAACAAATCTTGATATAGATAAGTTTGGGCTTGGCCTTCAATCAAGTGCTGGACTTGTAAACTCATTATCTGAGGGTAATTCTGTTAATCTGGCAAATGGATTCTATGTTGGTGAAGGGGGTAACTTTGGAAAGCCATTCGGTATTGGTGATGGTCAGTTTTTGGGTGTTGTAACATTTAATTGCACTAAGGGCAATAATTACAAATTTCAACTCTCTGGATCTTACTCAAGTTCTGGAAGGATGATGTTCAGATGTATGAATAATGGTAATTATGGTGCGTGGAAGGAGGTTCTAACTAGCGCATCCCCAAGTGTAGAATACGGAATTACAATTAAGCGTTCCGATCAGGGAAGGCCAAATCAATCTGGTTATATTGGTGTTGGTGGAAATGATGTTTATTTTAAAAACGGAACGTCTAATAGAGCACTACAGTTGAGAGATGATAGCTCTGTTGCATATGACGGAAGGGTTATAATAGATAGTGATAAGACTATGGTAATAGGTGCTGGTAAGGATATAAATCAACCAAATATTGGAGCTTGGATTAAGGGAATGCGCGATACTGGAGGTTCTAGGGTTATGCGTAATACTGGTGCGGCTTCTGCAGGTGGAGCTAACTTCCAGCATAACGCAGCTATCTACATGCTTGCAGGTGATACATTCGGATTGCTTTCAGTTGACTACAGGAATGCTAACGTTTACTCTATCGGCGCGAACAATAGCGGCCTCAATAGTGGCGTGGTTCAAGTCAATGCTCTATGGGGAACTAAAAACACAACCGTAGATGGCAATGGATTTATCAAGCGAGCTTCACCGATCGTGAGGGTTAAGAGGGATTCTTTCGAAACCAACGACGAATCTGAGGGCTGCACCGTTCAGCGAATCGGGGTTGGCGAGTACCTTATTGAAGGATGCACAGGATTGAACTCCGATCTTGCTTGGGGTGGCATTAGTGGTGGAATCGAAATCCCGGTTGACATAAACAAGCAGCCGCTATTGTGGGTTGATTATGAAGTAAACGCCGATGGATCAATAATCCTTAAAACATTCCATCGAACGCATGAGAGTGCGCCGAAGTTCGCAAGGAACGATAAGGAAGGTTATTCGAACGGCGATCCGATCGACATACCGAATGATGTTTTCGTTAGCATCCGTGTTGAAATGCCACCTAACAGCATTTACAACACCGAATTAGAAAGGATGGAGCGAGAAGTAAGAAACGGGGCAAAAAGAAGCGAGTGGGAGGAAGCACACGCAACAGGTTGCAAAGAAGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
780204bf9bcd591c03ce40fb838fcfc6b5b1ab92bae31cf7b2ccbad2ded97a7d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6555
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Sequences of Four Bacteriophages Infecting Toxigenic Escherichia coli (STEC) Dias,C., Almeida,C., Lobocka,M. and Oliveira,H. 2020-09-03 — GenBank