Protein
View in Explore- Genbank accession
- AIX17096.1 [GenBank]
- Protein name
- virion structural protein
- RBP type
-
TSP
- Protein sequence
-
MAQNTNLNVTPYYDDFDKDRNFYRVLFRPGFPIQARELSTMQSILQNQVESVGSHLFKDGAMVIPGQVGYDLNVQAILLQESFLGSDVETYRTQLTGTIIEGLTTGVKAKVLYSISASESERGYVTLYVKYIDSGDTTSESALNTFQINEQLIASKEITFGTTLIEIGTPFAQLLPVNATAVGSTAYISDGVYFIRGHFVNVPSSYLILNQYDTNPSYRIGLEILESIITPEDDESLNDNAAGTSNYSAPGAHRFKIGTQFVKRLITDEADKNFIELLRINNSNVESFVERTAYSELEKSMARRTYEESGDYVIDTFDVTPREHLNDGFNNGVYSANQTSSNGNLATDSKVALEVSPGTAYVRGYRTEFITPQYIDVDKPRDFDTRQNGIINFNLGNFLKVYDVYGWPEVSGDGVTDAYQILDLYDDYAANATSSVKAGANRIGRCRTVQLQKSSTALAATSPFGISPNITGGVYDLWVFDVQMFTVLNIANAVTPYTAGTRIVGKTSGAAGYIADTGNGSHYIYLEQVNGVFINSEILEVNGRTVGTLEAAWSYQLSDTRSCFGKDSGSNIIFGSNFILNDSRPVEASTVDIDDTTDDEITGFRTRFEKDLRPGDVVTPTISDFEGVNTHRILRVDPTAIATTAANKKSTVSAGNEIFDFAEQTAKIDGSLLNGTVTDGEYSELIRLRPFIFQKDYQNGELSFDLPEDTMKSLDDESFFVYRNFSSKTVTTGSITFTVPETESFAALSSDNYVLTVVSNGGSGTYSNGQNIDIDAEVDAANLTASFGANNQSFTVSGLGSVATVTLTALVSKNTVSKKLKTASKMQALKVFKTVEDLVEQPTGLTFSALYGTRVEDEDLSFGIQDVYRVHAVYESYDENDASAPYVVLTESVFFAGGTLIIGKTSGARGRVISFSNADLKLYYVGLNDIPFVQGETINGFNSANEDITGIIDDSDSSIFAGSKVVTNQFELEAGQKTNYYDVSRLRRLSTAVPPTRRLLVIFDYFAHASSGDYFSSQSYSGINFKEIPNYKLDGSIKFIRDQIDFRPGIKNLRNGSGTISAPYFVNCTTFDFVSRVFDNTGSTIFDIMQVNSSFRADYAWYLPRIDKLFLSHDGALRIAKGVSGYYLIPPADVQNSMLLATIEYKPYVFDPERDILITPEVLRRYTMKDIGDIEQRLTHVEYYTSLSMLESQADNTKTYDENGFDRLKNGYVVDDFTDHTTGDVLNVDYKCSLDFREGQLRPQHYTTNVGLRYNPTASTNVVRTNGNVVMLPFDDVAIVTQPYASRTENVNPFNVFTFIGRVDLTPASDDWIDIERLPARVENVEGDFSAVSRDLNVDQNGFAPIQWQSWQTTWKGETIRSRNRFTSRSGTYGVGRQLGRAGHGQRRQGLFYLHERRTIRVVNNQARQGIRTRVIPKIEQKSLGDTILSRTVIPWIRSRNIGFNVDRMKPRTRFYAFFDGDNVTNYITPKVVELIKNSTTDNRTNETPFVVGETVTGQTSGCQLKVVAPDDGYKTNPYGKGTETLPTSYSSQTVYLNHDITEISENISPNHFGNVQVGELLVGQTSGAIAVVKDRRILTDNVGNVQGTLFIPSPKNDANPRWATGTRSLRFTTSETNLKTPGTVDSSAQTTYSATGTLQTVRENILAVRNAEIVTDTVSEERVVQTTRTETRQVGWYDPLAQSFIIEEEGGMFLTGVDIFFNTKDANIPISMQIRTMENGYPTKTILPFSDVTITPDDIEISESAAVPSRFSFKAPVYIKSSVEYCFVLLSDSNEYQVWISRMGDVDVTGTRTISEQPYAGVLFKSQNASTWTADQYEDLKFTIYRANFTSTTGTVTLENAPQGKGNNGIHRLIENPIQTIKPKQVLSLGPAVTQYTFSQGARLLQQTTAAQATIISTTTSSSVSDTLTINDASGSWLQGTANTYLVRSSESLATIVAGSSSGTLEVGDIVTGATSNSVGIVKTWDGSTNLVLHYITGAFTDTETLSEPGGWTATVTSSAESGDSYGAYLTAAPTFDSDQTEVLVYHQNHGMYNRSNNVSVEGVISEISPTTLTGALAAGATSISVLDANTFHTTVNGSVVSGSNPGYIRINSELIQYSAISSDGKTITVATSGRGSNSTTDTTHPSGSVVECYNLDGIPLIDINKTHTSVSCPWLDTYMLHITGVANSGIRGGGINVYASQNIQFETLTPSVSVMDLPETDITARVNTTSATSIGDGSTSVDQASFVNDGSYVPVTLNDLNLFNNPRMICSEVNELAKLSGQKSFTMKVDLSTEKDTLSPVVDLDRCSLITTSNRINQWPGGPDAYGQQSQIDTSQDVSTLPFGDRNDAVYITRLARLIRESRSLRIDLQMSRPPEADVRIYYRAFSSGTNDDFDSIGWTLIDTPLQYDASPNEEILWKDYYYEVSGLNFNAFQIKIVMRSSNQARVPLIADLRCIALAT
- Physico‐chemical
properties -
protein length: 2442 AA molecular weight: 268414,81880 Da isoelectric point: 4,79002 aromaticity: 0,09623 hydropathy: -0,27854
Domains
Domains [InterPro]
IPR032096
STR
12–67
STR
12–67
IPR032096
STR
185–388
STR
185–388
1
2442
Architecture
STR 12-67 | STR 80-1327 | RBD 1328-2442
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
2442
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 1504 | 1504 | 0,8778 |
| Central domain | 1505 | 1715 | 212 | 0,2369 |
| C-terminal | 1716 | 2442 | 726 | 0,1382 |
Note: Constraints were applied during segmentation.
Fixed 39 C-terminal predictions appearing before Central domain
Fixed 39 C-terminal predictions appearing before Central domain
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-1504
1-1504
Central
1505-1715
1505-1715
C-terminal
1716-2442
1716-2442
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Synechococcus phage ACG-2014a [NCBI] |
1493507 | Uroviricota > Caudoviricetes > Pantevenvirales > Acionnavirus > Acionnavirus monteraybay |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
AIX17096.1
[NCBI]
Genbank nucleotide accession
KJ019039
[NCBI]
CDS location
range 76708 -> 84036
strand +
strand +
CDS
ATGGCACAAAATACCAATCTAAACGTTACACCTTATTACGACGACTTCGATAAGGATAGGAATTTTTATCGAGTTCTGTTCCGCCCTGGATTTCCAATTCAGGCGAGGGAACTTAGCACAATGCAGAGTATTCTGCAAAATCAAGTCGAATCGGTTGGTTCTCATCTATTTAAAGATGGTGCTATGGTCATCCCTGGACAAGTGGGATATGACTTAAATGTACAGGCAATTTTGCTGCAAGAATCTTTTCTTGGTAGTGATGTTGAGACATACAGAACTCAATTGACTGGTACTATCATTGAGGGTTTGACGACAGGTGTTAAGGCAAAAGTATTGTATAGCATCTCTGCCTCTGAATCTGAGAGGGGATATGTCACACTATATGTAAAGTATATTGATTCTGGGGATACAACTTCCGAATCTGCATTGAATACTTTCCAAATCAATGAACAGTTGATTGCAAGTAAGGAAATTACTTTTGGTACGACGCTGATTGAAATTGGCACTCCATTTGCTCAATTGTTGCCTGTTAATGCAACTGCAGTCGGATCGACAGCATACATTAGCGATGGTGTTTATTTCATTAGAGGTCATTTTGTTAATGTACCTTCTAGTTATTTGATTCTGAATCAATATGATACTAACCCTTCTTATAGAATTGGTTTAGAAATTTTAGAATCTATTATCACCCCCGAAGATGATGAATCTTTGAATGATAATGCTGCTGGAACATCAAATTATTCTGCACCTGGTGCCCATAGATTTAAAATTGGTACTCAGTTTGTAAAACGATTAATTACTGATGAGGCAGATAAAAACTTTATTGAACTTCTCAGGATCAATAACAGTAATGTAGAAAGTTTTGTTGAGAGAACAGCATATAGCGAACTTGAGAAGTCGATGGCTCGTAGGACTTATGAAGAGTCTGGCGATTATGTCATTGATACTTTTGATGTAACTCCTCGCGAGCATCTCAATGACGGATTTAATAATGGTGTGTATAGTGCGAACCAGACTTCTAGTAATGGAAACCTTGCTACAGATTCTAAGGTAGCATTAGAAGTTTCTCCTGGAACTGCATATGTTAGGGGTTATAGAACAGAGTTTATTACACCTCAATACATTGATGTTGATAAACCAAGGGATTTCGATACTCGTCAAAATGGAATTATCAACTTTAACCTTGGCAATTTCCTGAAAGTTTATGATGTTTATGGTTGGCCAGAAGTTTCTGGTGATGGAGTAACAGACGCATATCAGATTCTAGATCTTTATGATGATTATGCTGCGAATGCAACATCATCAGTAAAGGCAGGTGCTAATAGAATTGGTAGATGTAGAACTGTTCAGTTACAGAAGTCTTCTACTGCTCTTGCTGCAACGTCACCATTTGGAATTAGTCCTAATATAACTGGTGGTGTTTATGATCTATGGGTATTTGATGTTCAGATGTTCACCGTTCTGAACATTGCTAATGCTGTAACACCATATACAGCAGGAACTAGAATTGTAGGTAAAACATCTGGAGCAGCTGGTTACATTGCTGATACTGGAAATGGTAGTCACTACATTTATCTTGAGCAGGTCAATGGAGTATTCATTAATAGTGAAATTCTAGAAGTAAATGGAAGAACAGTTGGTACTCTTGAAGCAGCATGGTCTTATCAGTTAAGTGATACTAGATCGTGCTTTGGTAAGGATAGTGGCAGTAATATTATCTTTGGTTCTAATTTTATTCTGAATGACTCTAGACCTGTTGAGGCATCTACAGTTGATATTGATGATACAACAGATGATGAAATTACTGGTTTCAGAACTAGGTTTGAAAAAGATCTTCGTCCTGGAGACGTTGTTACTCCAACAATTTCTGATTTTGAGGGAGTAAATACTCATCGCATTTTAAGAGTTGATCCTACTGCTATTGCAACAACAGCAGCTAATAAGAAATCTACAGTTAGTGCTGGAAATGAAATCTTTGATTTTGCAGAGCAAACTGCAAAAATTGATGGCAGTCTGTTGAATGGTACAGTAACTGATGGAGAATATAGCGAACTAATTAGATTGCGTCCGTTTATCTTCCAAAAAGATTATCAGAATGGAGAACTTTCATTCGATCTTCCAGAAGATACTATGAAGTCTCTTGATGATGAATCATTCTTTGTATATAGAAACTTCTCTTCAAAAACAGTAACCACTGGTTCTATTACCTTTACTGTTCCTGAAACCGAATCTTTCGCAGCATTATCTTCTGATAATTATGTCTTAACTGTCGTTAGTAATGGTGGTTCTGGCACATATAGTAATGGTCAAAATATTGATATTGATGCTGAGGTAGATGCTGCAAATCTAACTGCTTCTTTTGGTGCTAATAATCAATCATTTACGGTTAGTGGATTAGGTTCAGTTGCAACAGTCACTCTGACCGCATTGGTTTCTAAGAACACTGTTTCTAAGAAACTGAAGACTGCTTCTAAGATGCAGGCATTAAAAGTATTCAAAACAGTAGAAGACTTAGTAGAACAACCTACAGGACTTACATTTAGTGCTCTATACGGAACCAGAGTTGAAGATGAAGATCTCTCGTTTGGTATTCAAGATGTATATAGAGTTCATGCAGTATATGAATCGTATGATGAGAATGATGCGTCGGCACCATATGTAGTTTTAACTGAATCAGTCTTCTTTGCAGGTGGAACATTAATTATTGGTAAGACTTCTGGTGCTAGAGGTCGTGTAATTTCATTCTCTAATGCAGATTTGAAGTTGTACTATGTTGGACTAAATGACATTCCATTCGTTCAGGGTGAAACTATTAATGGTTTCAATTCTGCTAATGAAGATATTACTGGTATTATTGATGACTCGGATTCTTCAATTTTTGCTGGTAGTAAAGTAGTTACAAATCAATTTGAACTTGAAGCGGGACAGAAAACTAATTACTATGATGTTTCACGATTAAGAAGATTAAGTACTGCTGTACCTCCGACAAGAAGACTGCTGGTAATCTTTGATTATTTCGCACATGCATCTTCTGGTGATTACTTCTCATCACAATCTTATAGTGGAATTAATTTCAAAGAGATTCCTAACTATAAATTAGATGGTTCTATTAAGTTTATTAGAGATCAAATCGATTTCCGTCCTGGTATTAAGAACTTAAGAAATGGATCAGGCACAATCAGTGCTCCATACTTTGTAAATTGTACTACGTTTGATTTTGTATCCAGAGTATTTGATAATACTGGATCAACAATCTTCGATATCATGCAAGTCAATTCTTCATTCCGTGCAGACTATGCTTGGTATCTTCCTAGAATTGACAAACTATTCTTATCGCATGATGGAGCACTTAGAATTGCTAAGGGTGTTTCTGGTTACTACTTGATTCCACCAGCAGACGTTCAAAATTCAATGCTTTTAGCGACTATTGAATACAAACCATACGTCTTTGATCCTGAAAGAGATATTCTGATTACTCCAGAAGTTCTCAGACGTTATACAATGAAGGACATTGGTGATATTGAGCAGAGATTGACTCATGTTGAATACTATACATCATTGTCTATGCTTGAGTCTCAAGCAGATAATACTAAGACCTATGATGAAAATGGTTTCGACCGTCTGAAAAATGGTTATGTTGTTGATGACTTTACTGATCACACCACTGGCGATGTATTAAACGTCGATTATAAGTGTTCTTTAGACTTTAGAGAAGGTCAGTTGCGTCCTCAGCACTATACTACTAATGTAGGACTTAGATATAATCCTACAGCATCTACTAATGTCGTTAGGACTAATGGTAATGTAGTAATGCTTCCCTTTGATGATGTTGCAATTGTTACCCAACCATATGCATCTAGAACTGAGAACGTCAATCCATTCAACGTCTTTACCTTTATTGGTCGTGTTGATTTAACACCTGCATCTGATGACTGGATTGATATTGAGCGTCTTCCTGCTCGTGTTGAAAACGTTGAAGGTGATTTCTCTGCTGTTTCTAGAGATCTCAATGTTGATCAGAATGGTTTTGCTCCTATTCAATGGCAGTCTTGGCAGACAACTTGGAAGGGTGAGACAATTAGATCTAGAAATAGATTTACATCTAGATCTGGTACATATGGTGTTGGTCGTCAGTTAGGTCGTGCAGGTCACGGTCAGCGTCGTCAAGGTCTATTCTATCTTCACGAACGTCGCACTATTCGTGTTGTTAATAATCAAGCACGTCAGGGTATTCGTACTAGAGTTATTCCTAAGATTGAACAGAAGTCTTTGGGAGATACAATCCTGTCACGTACAGTAATTCCTTGGATTCGCTCTCGTAATATCGGTTTCAACGTTGATCGTATGAAACCCCGTACAAGATTCTATGCATTCTTTGACGGTGATAATGTCACTAACTACATCACACCAAAAGTTGTTGAACTTATCAAAAACTCCACCACTGATAATAGAACCAACGAAACTCCTTTTGTTGTAGGTGAAACTGTTACTGGACAAACCTCTGGTTGCCAACTTAAAGTTGTTGCACCTGATGATGGATATAAAACTAATCCATATGGTAAGGGTACAGAAACTCTTCCAACTTCATACTCATCCCAAACAGTATATCTAAATCATGATATCACTGAAATTTCTGAGAATATATCACCAAATCATTTTGGTAATGTTCAGGTTGGGGAACTTTTAGTTGGTCAAACGTCAGGTGCAATTGCGGTGGTAAAAGATCGTCGCATCCTCACTGATAACGTTGGTAATGTTCAGGGTACATTATTCATTCCTTCCCCTAAGAATGATGCCAACCCACGTTGGGCAACAGGTACTCGCTCTTTGCGTTTCACAACTTCGGAAACTAATCTGAAGACACCTGGTACTGTAGATTCTTCTGCACAAACAACGTATTCGGCAACAGGTACTCTTCAAACTGTTCGTGAAAATATTTTGGCAGTTAGAAATGCTGAAATTGTTACCGATACTGTTAGTGAAGAAAGAGTTGTCCAGACAACTAGAACAGAGACTCGTCAGGTTGGTTGGTATGACCCTCTGGCACAGTCCTTCATTATTGAAGAAGAAGGTGGTATGTTCTTAACTGGTGTTGATATTTTCTTCAATACTAAGGATGCGAATATTCCTATCTCCATGCAGATTCGTACCATGGAAAATGGATATCCAACTAAGACTATCCTTCCTTTCTCTGATGTAACAATTACACCAGATGATATTGAGATCTCAGAAAGTGCTGCTGTTCCTAGTAGATTCTCTTTCAAAGCACCTGTTTATATTAAGTCTTCAGTAGAATATTGTTTTGTTCTACTTTCCGACTCAAATGAATATCAGGTTTGGATTTCTAGAATGGGTGATGTTGATGTAACTGGAACTAGAACAATCTCCGAACAACCATATGCTGGTGTTCTGTTTAAGTCTCAGAACGCATCTACCTGGACTGCTGACCAGTATGAAGACTTGAAATTCACGATTTATCGTGCAAACTTCACTTCGACTACAGGTACAGTAACTTTAGAGAACGCACCTCAAGGTAAAGGTAACAATGGTATTCATAGATTGATTGAAAATCCAATTCAAACAATCAAACCAAAACAAGTTCTGTCTCTTGGACCTGCTGTAACTCAATACACATTTAGTCAAGGTGCTCGTCTTCTACAGCAAACTACTGCTGCTCAAGCTACTATCATATCAACGACAACTTCGAGTTCCGTTTCTGATACTTTGACTATCAATGACGCATCTGGGTCTTGGTTACAAGGAACTGCCAACACATATTTGGTAAGATCTTCCGAATCATTAGCAACAATTGTTGCTGGCAGTTCTTCTGGAACATTGGAAGTTGGTGATATTGTTACTGGTGCAACTTCAAACTCAGTCGGTATTGTTAAGACTTGGGATGGTTCTACTAACTTAGTTCTTCATTATATTACTGGCGCATTCACGGATACAGAAACTCTTTCTGAACCTGGTGGATGGACTGCTACTGTCACTTCTTCTGCTGAGAGTGGTGACTCTTACGGTGCATATTTGACTGCAGCACCTACATTTGATAGCGATCAAACTGAAGTCTTGGTTTATCATCAAAACCATGGAATGTACAACAGATCTAATAATGTAAGTGTTGAGGGTGTTATTTCTGAAATTTCACCAACTACTCTGACAGGTGCATTAGCAGCGGGTGCTACTAGTATATCTGTTCTTGATGCTAATACTTTCCATACTACAGTAAATGGATCGGTTGTCAGTGGTTCAAATCCTGGATACATTCGCATTAATAGTGAATTAATTCAGTATTCGGCAATCTCTAGTGATGGTAAGACAATCACTGTAGCAACTTCTGGTAGAGGTTCAAATTCAACTACAGATACTACACATCCATCAGGTTCTGTTGTTGAATGTTACAACTTGGATGGCATTCCACTGATTGATATTAATAAGACTCATACATCTGTGTCTTGCCCATGGTTAGATACTTACATGCTACACATCACTGGTGTTGCAAATAGTGGAATCCGAGGTGGTGGTATCAATGTTTATGCATCTCAGAATATTCAATTTGAAACTCTGACACCTAGTGTCTCGGTCATGGATCTTCCAGAAACCGATATCACTGCTAGGGTAAATACTACTAGTGCAACATCTATTGGAGATGGAAGCACCAGTGTAGATCAAGCATCATTTGTTAATGATGGTTCATATGTTCCAGTAACATTAAATGATCTGAACTTGTTCAATAATCCAAGAATGATTTGTTCTGAGGTTAATGAACTTGCTAAATTGAGTGGTCAAAAATCATTCACGATGAAGGTAGATCTTTCTACAGAAAAAGATACACTTTCACCTGTAGTTGATTTGGATAGATGTTCATTAATCACAACTTCAAATAGAATCAATCAGTGGCCTGGTGGTCCTGATGCATATGGTCAGCAATCACAGATTGACACATCGCAAGATGTATCTACTCTGCCTTTCGGTGATCGTAATGACGCGGTTTATATCACTCGTCTTGCAAGATTGATCAGAGAATCTAGATCTCTGAGAATTGATTTACAAATGTCTCGTCCTCCTGAGGCAGATGTTAGAATCTACTACAGAGCATTTAGTTCTGGTACAAATGATGATTTTGATTCTATTGGTTGGACTCTAATAGACACTCCACTGCAATATGATGCTTCTCCTAACGAAGAAATTCTTTGGAAGGATTACTATTATGAAGTCAGTGGTTTGAATTTCAATGCATTCCAAATTAAAATTGTAATGAGATCTTCAAATCAGGCAAGAGTACCATTAATTGCAGACCTTCGCTGTATCGCCCTTGCTACCTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
1e9efa1c1dc98b96df2ca44158eeea8532a637df1048c107e2198f0ca5ca8814
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50
Literature
| Title | Authors | Date | PMID | Source |
|---|---|---|---|---|
| Ecological redundancy of diverse viral populations within a natural community | Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. | 2015-03-20 | — | GenBank |