Protein

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Genbank accession
AYD85242.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MATLKQIQFKRSKTAGARPAASVLAEGELAINLKDRVLFTKDDQGNIIDLGFAKGGSIDGNVIHIGNYNQTGDYTLNGTFTQTGNFNLTGIARVTRDIIAAGQIMTEGGELITKSSGTAHVRFFDGNSRERGIIYAPANDGLTTQVLNIRVQDYAAGSESTYAFSGSGLFTSPEVSAWKSISSPQILTNKVITNNKSTGDYDIYSMADNVPLSESTTAINHLRVMRNAVGSGIFHEVKDNDGITWYSGNGLDAYLWSFTWSGGIKSSHSISIGLTSGSKDYSILGPSSIALGDNDTGFKWHQDGYYFSVNNGTKTFLFSPSETTSLRKFVVGYSTNGTDLTTPPTENYALATVVTYHDNNAVGDGQTLLGYYQGGNYHHYFRGKGTTNINTHGGLLVTPGNIDVIGGSVNIDGRNNSSTLMFRGNTTGSSSVDNMTISVWGNTFINPSEGTRKNVMEISDATSWMSYIQRTTAGKVESVINGTQIVNENLTVVKNATFDGTISAAGEIATNAVNGLRIWNADYGAIFRRSEGSLHIIPTAFGEGQNGDIGPLRPFSISLDTGKVVIPDLDLSYASFAANGYIKFGGHGAGAGGYDIQYAQAAPVFQEIDDDAVSKYYPIVKQKFLQGKAVWSLGTEINSGTFVLHHYKEDGSQGHTSRFNQDGTVNFPDNVSVGGGEATIARNGNIWSDIWKPFTSAGDTTNIRDAIATRVSKEGDTMTGRLTLSAGNDALVLTAGVGASSHIRSDVGGTNNWYIGKGGGDNGLGFYSYITQGGVYITNNGEIALSPQGQGTFNFNRDRLHINGTQWVAHQSGAWGDQWGLEAPIFVDFGSVSNDCYYPIIKGKSGITNEGYFSGVDFGMRRITNTWAQGIIRVGNQENGHDPQAIYEFHHNGVMYVPNMVKTGRLSAGGGDPVWGGACLAIGDNDTGLVHGGDGRINMFADGVHIASWGSQRLAHEGLWDSYGAFWTEVGKAIVSHGHLVQANDSYSTFVRDVYVRSDIRVKKDLVKFENASQKLSKINGYTYMQKRGLDEEGNQKWEPNAGLIAQEVQAILPELVEGDPDGEALLRLNYNGVIGLNTAAINEHTAEIAELKSEIEELKALVKSLLK
Physico‐chemical
properties
protein length:1108 AA
molecular weight: 119157,53150 Da
isoelectric point:5,54660
aromaticity:0,09657
hydropathy:-0,30469

Domains

Domains [InterPro]
DC_0538
STR
1–692
DC_0538 G3DSA:6.20.80.10 IPR030392
IPR048390
ATT
449–557
IPR048390 DC_0339 Coil
IPR030392
CHP
998–1057
IPR030392
DC_0594
RBD
1005–1108
DC_0594
AYD85242.1
1 1108
Architecture
STR
ATT
STR
RBD
STR 1-448 | ATT 449-557 | STR 558-1035 | RBD 1036-1108
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AYD85242.1
1 1108
Domain Start End Length (AA) Confidence
N-terminal 1 474 474 0,1130
Central domain 475 673 200 0,3068
C-terminal 674 1108 434 0,8092
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-474
Central
475-673
C-terminal
674-1108

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_vPM_PD112
[NCBI] 		2315580 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tequatrovirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
b32b998eb63557cc14cae288b0ec6c9ca02a60e1c16b1e9c08ece9767d7c85c0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5319
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50