Protein

View in Explore
Genbank accession
WPK29292.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,99
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTYSGGSVDLSALAVERGQFVHLPTSFGNNVTLTAKNQTIGRGAGRYRWAGSLPKSILASDTLETSGGLGPNAWVLTNTEGLLTPRGGTYNDLFDVVYLSEFANNTTTYTTPEAAFQAALLAAKASKSKILDAYGCDMTFTTSSFDIQDITLRGGVFRGQRDYRVQNATVEGTTFRNSRVMYWGGAVRMFDCLWDGAPRAGQVGSLVFQGNPISGTFEIDNCTFKNGLYGFNKGQGNQ
Physico‐chemical
properties
protein length:238 AA
molecular weight: 25645,32380 Da
isoelectric point:7,66323
aromaticity:0,11345
hydropathy:-0,23193

Domains

Domains [InterPro]
IPR040775
RBD
17–76
IPR040775 IPR011050
G3DSA:2.10.10.80
ATT
20–78
G3DSA:2.10.10.80
G3DSA:2.10.10.80
ATT
30–75
G3DSA:2.10.10.80 DC_0354
WPK29292.1
1 238
Architecture
ATT
STR
ATT 17-140 | STR 141-232 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPK29292.1
1 238
Domain Start End Length (AA) Confidence
N-terminal 1 105 105 0,9728
Central domain 106 227 123 0,9852
C-terminal 228 238 10 0,1957
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-105
Central
106-227
C-terminal
228-238

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_EP57
[NCBI] 		3090672 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK29292.1 [NCBI]
Genbank nucleotide accession
OR544956 [NCBI]
CDS location
range 56970 -> 57686
strand -
CDS
ATGACTTATTCTGGGGGATCTGTAGATCTTTCTGCACTGGCTGTTGAACGTGGACAATTTGTCCATTTGCCTACAAGCTTTGGTAATAACGTAACCCTGACAGCTAAAAATCAGACGATTGGACGTGGTGCTGGTCGTTATCGTTGGGCTGGAAGTTTACCAAAAAGTATTTTGGCCTCTGACACATTAGAGACAAGCGGTGGATTAGGTCCAAACGCATGGGTTCTAACTAATACGGAAGGACTGTTAACCCCTCGTGGTGGAACATACAACGATTTATTCGATGTTGTCTACTTGTCAGAATTTGCTAACAATACAACTACCTATACCACACCAGAAGCAGCTTTCCAGGCGGCACTGTTAGCAGCAAAAGCTTCGAAAAGCAAGATTCTCGATGCTTACGGTTGCGATATGACTTTCACGACAAGCTCTTTTGATATTCAAGATATCACTTTGCGTGGGGGTGTGTTCCGTGGTCAACGCGACTATCGTGTGCAAAATGCTACAGTAGAAGGCACAACTTTCCGTAACTCTCGTGTTATGTATTGGGGTGGTGCTGTGCGCATGTTCGATTGTTTGTGGGACGGTGCTCCTCGCGCAGGTCAAGTTGGTAGCTTGGTATTCCAAGGCAACCCAATATCAGGTACTTTTGAAATTGATAACTGTACTTTTAAAAACGGGTTATATGGCTTCAACAAGGGACAGGGGAACCAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6a4aa5ec8483dc0972ffb727e36a1b18ae9bef99bef8ac63e5a780bd32bc97fe
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7631
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome sequencing of NWU_EP_32a Oluwarinde,B.O., Montso,P.K. and Ateba,C.N. 2024-10-22 — GenBank