Protein

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Genbank accession
QAX98296.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAVGEIQISALPQASLPIELSDIFHLKQGIEDKRCTLEQLLDPHASLRNNPHGVTKVQVELGNVLNALQLVAANNLSDIVDVAEARANLQIMSSDEVNQLIQNHINDKNNPHNTTKSQVGLGNVQNWLASNAYNEDADKYATARAVNSLYRAVQASYPVGTIHLSMNAANPSTYLICGGTWVLVSRGRALVGFDSTSRPAGSTFGSQTASLSANNIPAHTHSVYVTGGGHSHGATASVSSFDYGTKGTTTFDYGTKTTSSFNYGNKTTSSAGFTQTTWINRGYDNGSLPGLSVVGADYDPRATLTTANNHTHTVAIGAHSHTVGIGAHSHSVAIGSHSHTATVTVTGAGEHSHSGTTGSTGSGQAFNIEQPSFVLYVWQRTA
Physico‐chemical
properties
protein length:382 AA
molecular weight: 40223,69950 Da
isoelectric point:6,44897
aromaticity:0,06545
hydropathy:-0,27147

Domains

Domains [InterPro]
DC_1039
STR
1–382
DC_1039
IPR051934
Unmapped
119–346
IPR051934
SSF88874
STR
152–283
SSF88874
IPR053827
ATT
154–257
IPR053827
QAX98296.1
1 382
Architecture
STR
ATT
STR
STR 1-153 | ATT 154-257 | STR 258-382
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EcSzw-2
[NCBI] 		2419741 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QAX98296.1 [NCBI]
Genbank nucleotide accession
MH791400.1 [NCBI]
CDS location
range 49791 -> 50939
strand -
CDS
ATGGCAGTAGGTGAAATTCAAATTAGTGCCTTGCCTCAAGCGTCGTTACCAATTGAGTTAAGTGATATCTTCCACCTTAAACAAGGTATTGAGGATAAGAGATGTACACTTGAACAATTACTTGACCCTCACGCATCCTTGAGGAATAACCCTCACGGTGTTACAAAAGTTCAGGTTGAGCTAGGCAACGTGTTAAATGCTTTACAGCTTGTCGCTGCAAACAACTTATCAGATATCGTTGACGTAGCTGAAGCAAGAGCAAACTTACAGATTATGTCTTCTGATGAAGTTAATCAACTTATCCAGAACCACATTAATGACAAGAATAACCCTCACAATACAACTAAATCACAAGTTGGTTTGGGGAATGTTCAGAACTGGTTAGCTTCCAACGCATATAATGAAGACGCTGATAAGTATGCTACAGCAAGGGCAGTAAACAGCTTGTATAGGGCTGTACAGGCTTCTTATCCAGTAGGTACTATCCATCTGTCTATGAATGCTGCTAACCCATCTACATATCTAATTTGTGGTGGTACTTGGGTGTTAGTATCCAGAGGTAGAGCTTTAGTAGGTTTTGATAGCACATCCAGACCAGCGGGTTCAACGTTTGGTTCTCAAACTGCTTCACTATCTGCTAATAATATTCCTGCACACACCCACTCAGTGTATGTAACTGGTGGCGGTCACTCACACGGTGCAACTGCTTCAGTTAGTTCATTTGATTATGGTACTAAAGGAACTACCACATTTGATTATGGTACTAAGACAACATCATCATTCAATTATGGTAATAAAACTACGAGTTCTGCTGGATTCACCCAGACAACGTGGATTAACCGTGGTTATGATAACGGTAGTTTGCCGGGACTTTCAGTAGTTGGTGCAGACTATGACCCAAGAGCCACTCTGACAACTGCTAACAACCATACTCACACTGTAGCAATTGGTGCTCACAGCCACACAGTTGGTATTGGTGCTCACAGCCACTCCGTTGCTATTGGTAGTCACTCACATACGGCTACGGTGACGGTTACTGGTGCAGGTGAGCATTCCCACTCTGGTACAACTGGCTCAACTGGTTCTGGTCAGGCATTTAACATTGAACAGCCATCATTTGTTCTATATGTATGGCAGAGAACTGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9107da70f8d626822a14e0ad18bf9a1e4b9f40f1b3b450526fef6424ba4fb440
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7118
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
EcSzw-2, Complete genome sequences of 3 novel enterobacteria, Pakpunavirus like phages Yuan,S., Ma,Y. and Liu,Q. 2020-07-27 — GenBank