Protein

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Genbank accession
GENB_daed3a03da8e [GenBank]
Protein name
receptor binding protein
RBP type
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MANQFMAHFGPSYVETTHFGENNSVKYKLELQGSNLDSTVTTSYVKVNGVSVVPNTLRGITAVTINELGAASNIATFDLYQRPEHFETLRDYLMSAPSNRIIALVSWDAIKSDATFDTFMDQYGAVSWPGVDYLNKAGTSGSFYARSSYAAIFNTTLKRFCYENFVGNNPDRNEDTTAKIEVVFDTVWDIGACGTAERQVDDITEYFSEGGQYEFKKYFYEPISLYGAIYHFKCELYRDQALIDAKGVSRFYLWSQEASGKWINSVSLAADSSTAGEWVWVEGYFKIPENPTTATHWGCAVYRHPSTVKVGKAGCRNVTVTRVTRNADDKVTNAAFGVNGMRSNQIEESADLGNPVMQLLNLKPKNSVTTHELKERQ
Physico‐chemical
properties
protein length:377 AA
molecular weight: 42140,49120 Da
isoelectric point:5,47743
aromaticity:0,12467
hydropathy:-0,36074

Domains

Domains [InterPro]
DC_0912
STR
1–377
DC_0912
PS52031
LEC
23–199
PS52031
GENB_daed3a03da8e
1 377
Architecture
STR
STR 1-377
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_daed3a03da8e
1 377
Domain Start End Length (AA) Confidence
N-terminal 1 171 171 0,0487
Central domain 172 366 196 0,2843
C-terminal 367 377 10 0,9764
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-171
Central
172-366
C-terminal
367-377

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage asfd_1h
[NCBI] 		2698918 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
MN871507.1_CDS_[135881..137014] [NCBI]
Genbank nucleotide accession
MN871507.1 [NCBI]
CDS location
range 135881 -> 137014
strand +
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
7edffb55d0dd8202735364146b9e0cd54e17e1f8176e8e2c2802d0a4f4a2ff4d

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,6741
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50