Protein

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Genbank accession
AUR88075.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTRRFLDQIRAEINTYLVTGGGTTANELSPTLIDMLDSTIEDESAIFSLVQTDNVPTTTGWTKINTTVYGGSQGGDGVFLKPDFANGQIVTNTVAGFSYNVGAAISFEGQANTRFDFRLLKDGIPVGIIDIQTGEGSNDPITANPRAYISSADSDAVFSVGVRSPDGANNIDIISAVLYATILPTNNP
Physico‐chemical
properties
protein length:188 AA
molecular weight: 19888,78830 Da
isoelectric point:4,13637
aromaticity:0,07979
hydropathy:-0,04574

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.108.O._10N.222.51.A4
[NCBI] 		1881194 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio breoganii
[NCBI] 		553239 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR88075.1 [NCBI]
Genbank nucleotide accession
MG592482.1 [NCBI]
CDS location
range 6365 -> 6931
strand +
CDS
ATGACACGCAGATTTTTAGATCAAATTAGAGCAGAGATAAATACCTACCTTGTTACTGGAGGCGGTACCACTGCAAACGAACTAAGCCCGACTTTAATAGATATGCTCGACTCAACCATTGAGGATGAATCGGCAATTTTTTCACTTGTGCAGACCGACAATGTACCAACAACCACCGGATGGACGAAGATTAACACCACTGTTTACGGTGGGTCTCAGGGTGGTGACGGTGTGTTTTTAAAGCCTGATTTTGCCAATGGCCAGATAGTGACAAATACGGTTGCTGGATTTAGCTACAACGTCGGAGCGGCTATATCATTTGAAGGCCAAGCAAATACTAGGTTTGATTTTAGGCTGTTAAAGGATGGCATTCCAGTTGGAATTATTGATATTCAAACTGGTGAGGGCAGCAACGACCCGATAACAGCAAACCCAAGGGCATATATTTCATCCGCTGATAGTGATGCCGTATTTTCAGTTGGGGTAAGAAGTCCGGACGGAGCAAATAATATAGACATTATAAGCGCAGTCTTATACGCGACAATACTGCCAACTAATAACCCGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
d1c1e179da33a50119ad6a7b8f31530479d734684b72f712c71b1f8458bd9a50
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7751
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank