Protein
View in Explore- Genbank accession
- XLZ95814.1 [GenBank]
- Protein name
- hypothetical protein
- RBP type
-
TSP
- Protein sequence
-
MPLVTLKWDDDNSDLTGFEVRGSTQVQWFSDMAVKANLGPTVKEYSEDRQTNEPYFLQVAAERNGQKAISEQTALTYPAQVMTTPDLSMVTKTVRGTRLASGRLGAGSHRENNGGPSMTDKCLVTRDGKFLVITDNEVRQFKMNVDEYTVLSNEPLPGTVRWAGLDNRGTIYLLIQGTPYTLHKFNPTTGLCTLVFTFPASETWSNAMVSPYSGQTGVLVLFGSDLVGGKMPIGVLDLTSAQYQVVMSPAVDPSVTNAYGGWVGHGVDNSIGDVMIYWPRSSKYAVKFAVRNMTATLHDLLEVFPDSNVNPRNGVLHLADDNTLTFKFIGGGTIYTLDVATMALSKAQVNVTLNDTAEGSGFVTFAESNVVANYLPSGDYIFMGAGVASALVVLSDFSGGYTIQIGTGGMGHLVVNEGVVRAYSGSRCWEMAWGLAPSMAVPDSYYAGCAVRANGVAVN
- Physico‐chemical
properties -
protein length: 459 AA molecular weight: 49361,22360 Da isoelectric point: 5,04704 aromaticity: 0,09368 hydropathy: -0,02941
Domains
Domains [InterPro]
DC_1838
ATT
1–125
ATT
1–125
IPR011043
STR
122–354
STR
122–354
1
459
Architecture
ATT 1-125 | STR 126-354 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
459
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 320 | 320 | 0,1991 |
| Central domain | 321 | 448 | 129 | 0,7302 |
| C-terminal | 449 | 459 | 10 | 0,1877 |
Note: Constraints were applied during segmentation.
Fixed 24 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 24 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-320
1-320
Central
321-448
321-448
C-terminal
449-459
449-459
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Aeromonas phage vB_C4 [NCBI] |
3384841 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Aeromonas veronii C4 [NCBI] |
1899528 | Mucoromycota > Mucoromycetes > Mucorales > Lichtheimiaceae > Circinella > |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
XLZ95814.1
[NCBI]
Genbank nucleotide accession
PQ676986
[NCBI]
CDS location
range 18306 -> 19685
strand +
strand +
CDS
ATGCCGTTAGTGACGCTCAAATGGGACGACGATAACTCCGACCTCACCGGGTTCGAGGTGCGCGGGTCCACCCAAGTACAATGGTTTAGTGACATGGCGGTGAAGGCCAACCTTGGCCCTACCGTCAAAGAGTATTCCGAAGACCGGCAGACCAATGAGCCGTATTTCTTGCAAGTGGCGGCCGAGCGGAATGGCCAGAAGGCTATTTCCGAGCAGACCGCGCTCACCTATCCGGCGCAGGTTATGACCACGCCGGACCTGAGCATGGTCACTAAGACCGTCCGCGGTACCCGCCTGGCTAGTGGTAGATTGGGCGCCGGTAGCCACCGCGAAAACAACGGTGGGCCAAGCATGACGGATAAGTGCCTCGTCACCCGTGACGGCAAATTCCTGGTGATCACGGACAACGAGGTGCGCCAGTTCAAGATGAACGTGGATGAGTACACCGTGCTCTCCAACGAGCCGTTGCCTGGTACCGTGCGGTGGGCGGGCCTCGACAATCGCGGCACCATCTACCTACTGATCCAGGGCACCCCGTACACACTGCACAAGTTCAACCCGACTACCGGTTTGTGTACGCTCGTTTTCACCTTCCCCGCGTCCGAGACCTGGTCTAACGCGATGGTGAGCCCGTACTCTGGCCAAACCGGGGTCCTGGTGCTGTTCGGTTCTGACCTGGTGGGCGGTAAGATGCCGATCGGCGTCCTGGACCTGACTAGCGCCCAGTACCAGGTCGTCATGAGCCCGGCCGTCGATCCGTCAGTGACCAACGCTTATGGCGGGTGGGTAGGGCATGGGGTGGATAACAGCATCGGCGACGTGATGATCTACTGGCCACGGTCGTCAAAATACGCGGTTAAATTCGCGGTGCGCAATATGACTGCGACCCTCCATGACCTGCTGGAGGTCTTCCCGGATAGCAATGTTAATCCGCGAAACGGCGTCCTGCACCTGGCCGATGACAACACTCTCACGTTTAAGTTTATCGGCGGCGGCACCATCTACACCCTGGACGTGGCCACGATGGCGCTCAGCAAGGCGCAGGTGAATGTGACCCTGAACGACACCGCGGAGGGGTCTGGGTTTGTGACCTTCGCAGAATCGAATGTGGTGGCCAACTACCTGCCGAGCGGAGACTACATCTTCATGGGGGCAGGTGTGGCCAGCGCACTGGTGGTTTTGAGTGACTTCTCGGGCGGCTACACCATTCAGATAGGAACAGGCGGTATGGGACACTTGGTAGTTAACGAGGGTGTAGTTCGCGCTTATAGCGGGTCTCGCTGCTGGGAGATGGCCTGGGGTCTGGCCCCTTCGATGGCGGTACCTGACTCCTACTATGCCGGGTGCGCGGTGCGGGCCAACGGCGTGGCAGTAAACTGA
Genome Context
Genome Context
Tertiary structure
PDB ID
57b23517dec43cc88d5679d099ad7b70a276b5682eed8d09dc5d4cab9044473e
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50