Protein

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Genbank accession
AKU45310.1 [GenBank]
Protein name
minor capsid protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALKTKPRWDKYDGYVGNYRGVLGEDIDLDTEANRVLAVGTNSNGAIVVGAGQTGIKGLMIVAVGADIHGAMLDGGINNHAGDPQDVGKHGEITNFQPTVFGRTFGVAISATEGNVKLAVNGVDTGNIAYNTSAANLKSGIVAVDDGFTADDFTVTGTAPNFTVVTTRTDVTITASGDGVTVTEATAVAAAGTNYYGHADGTVNAVKGSDGVYVGHTQEADRLIVNVKDEED
Physico‐chemical
properties
protein length:232 AA
molecular weight: 23779,86640 Da
isoelectric point:4,54333
aromaticity:0,06034
hydropathy:-0,09095

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AKU45310.1
1 232
Domain Start End Length (AA) Confidence
N-terminal 1 120 120 0,0018
Central domain 121 221 102 0,2351
C-terminal 222 232 10 0,5537
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-120
Central
121-221
C-terminal
222-232

Taxonomy

  Name Taxonomy ID Lineage
Phage Mycobacterium phage Madruga
[NCBI] 		1675552 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AKU45310.1 [NCBI]
Genbank nucleotide accession
KR997933 [NCBI]
CDS location
range 12421 -> 13119
strand +
CDS
ATGGCGCTTAAGACCAAGCCGCGCTGGGACAAGTACGACGGCTACGTTGGCAACTACCGGGGCGTCCTCGGTGAGGACATCGACCTGGACACCGAAGCGAACCGAGTTTTGGCAGTCGGCACAAATTCGAACGGCGCTATTGTTGTTGGTGCCGGTCAAACCGGAATCAAGGGTTTGATGATTGTTGCTGTCGGCGCTGATATTCACGGTGCGATGCTTGACGGCGGAATCAACAACCATGCGGGTGATCCGCAGGATGTCGGAAAGCACGGCGAAATCACGAATTTCCAACCGACGGTTTTCGGACGAACCTTCGGAGTTGCGATTTCTGCAACCGAAGGAAACGTGAAGTTGGCCGTGAACGGTGTTGACACCGGAAACATCGCCTACAACACATCTGCTGCAAATCTGAAGTCGGGCATTGTTGCAGTCGATGACGGTTTTACTGCGGATGATTTTACGGTGACCGGTACGGCTCCGAATTTCACTGTCGTTACGACTCGAACTGACGTTACGATCACTGCTTCCGGTGACGGTGTGACCGTTACCGAAGCAACTGCGGTTGCTGCGGCTGGCACGAATTACTACGGCCACGCAGACGGAACTGTAAATGCCGTCAAGGGTTCTGATGGTGTTTACGTCGGTCACACCCAAGAGGCTGATCGACTCATCGTGAACGTCAAGGACGAAGAAGACTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
2cf7ddff5a5b2347388f7bf2be7d6f433f5908a6dbbf4a4f2fec2ece9df004d3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6720
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50