Protein

View in Explore
Genbank accession
QIG67864.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MGILAEQIAQQKEAQVPQGIVSVTPSDTVKLTKPIRGFMVTVAGDVSVLMTDGTSGVMPGCTPGIQYMGKITRINLTGTAASGIKGFI
Physico‐chemical
properties
protein length:88 AA
molecular weight: 9080,57220 Da
isoelectric point:8,97827
aromaticity:0,03409
hydropathy:0,29886

Domains

Domains [InterPro]
IPR061180
Unmapped
17–87
IPR061180
DC_2205
STR
20–87
DC_2205
QIG67864.1
1 88
Architecture
STR
STR 20-87 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_Y60
[NCBI] 		2509569 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG67864.1 [NCBI]
Genbank nucleotide accession
MN988484.1 [NCBI]
CDS location
range 39865 -> 40131
strand -
CDS
ATGGGCATTCTAGCCGAACAGATCGCACAGCAAAAAGAAGCACAGGTTCCGCAAGGCATTGTGTCCGTCACGCCGTCCGATACGGTCAAGTTGACCAAGCCGATTCGCGGGTTCATGGTCACGGTCGCCGGCGACGTCTCGGTTCTCATGACTGACGGGACGTCAGGCGTCATGCCGGGCTGCACACCCGGTATTCAGTACATGGGTAAGATCACCCGGATCAATCTGACCGGAACCGCTGCATCGGGTATCAAGGGCTTCATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
74541bc19774329cc1d5bc61bf908974a33b9eafc671dc1d0ce52abf579188df
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8524
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank