Protein

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Genbank accession
QQM14068.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MSKRNYPHTPVSATLTAGSDTRDAWPVAFGDELGRALFLFKTMQDRDSFATAFPARLFKSWCFVKDNGEGVPAWFEWSGIVEDGSDGTWSPLKIFNLPARGLTFVNADGSTTNDIEVLGLQGLELQGSEKDGFTLVVKGGQATGTFEVVNWNPKSPDNVTHATGIKLGQFLEAYPDPDSGKAVLIIKPGSFARPTAPSMLAYLEDPVDVYGKIGTRERIHAGGIWCGDVVYSDPSLIPMYRKDKAIGLQEYDGLDPNVTGGDQFLLGAIVNLNGNAPDDGSVRVEWYDITIGEVARDMEGNMLAVERSYKKGDELTPEHNPLLLLGVVATKGLEKYRLVVTDNFADDVLRVQDYTSGPTGIIAQSLSGNSKASAALTQFAEDTGFDIRPEVRYLGAARASMDIYAAQDAQPYESDAGMVATSATGFAIETLSKINTRVENECLIIESADLTLSDMMLKFVFSNIETTMLRGKQVNVPITLMNKDSAWNVGLFAWVGAADAFGRIYNGRNGSDLSLNTGWRLADSDFISEEVVQGEHDIGFTFTVPKDAVNYAIGLWPSDPRNPLHIELKHMGVDVAVPFWGYSLNAPKIKDLSYLRELGITAVFVQDTQGNAGLRYTLGDSAGGNPLPLGINQHKLPSVFSFDTSMNVVNGSSASGGEGALVCNASGQLTLQFDLSLWSEQKVDTTASFWVVRFDADGNAVAVSTLQTFPVKAGSVNVNRQTAPITIDVMAGDKLGLRGSSNIADGAFLECNNNAQPLVKTFATFKESTR
Physico‐chemical
properties
protein length:770 AA
molecular weight: 83152,47090 Da
isoelectric point:4,70572
aromaticity:0,09221
hydropathy:-0,14039

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QQM14068.1
1 770
Domain Start End Length (AA) Confidence
N-terminal 1 210 210 0,9907
Central domain 211 409 200 0,5151
C-terminal 410 770 360 0,8829
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-210
Central
211-409
C-terminal
410-770

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage pVco-14
[NCBI] 		2781113 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio coralliilyticus
[NCBI] 		190893 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQM14068.1 [NCBI]
Genbank nucleotide accession
MW114771.1 [NCBI]
CDS location
range 11351 -> 13663
strand +
CDS
ATGAGCAAACGTAATTATCCGCACACTCCAGTCAGCGCGACTTTAACAGCGGGCTCCGACACACGTGACGCGTGGCCTGTTGCTTTCGGTGACGAGTTAGGGCGTGCTTTGTTCTTATTTAAAACAATGCAAGACCGCGATTCATTTGCAACAGCGTTTCCAGCACGACTGTTTAAATCTTGGTGTTTTGTAAAAGACAACGGTGAAGGCGTCCCGGCTTGGTTTGAATGGTCGGGTATTGTCGAAGACGGCTCCGATGGTACGTGGTCACCTTTAAAGATCTTCAACTTGCCAGCGCGTGGGCTAACTTTTGTAAACGCTGATGGTTCAACAACTAACGATATTGAAGTTTTAGGATTGCAAGGCTTAGAGCTGCAAGGTAGCGAAAAAGATGGCTTCACGTTAGTTGTTAAAGGCGGTCAAGCAACTGGCACTTTTGAAGTTGTTAACTGGAACCCTAAGAGTCCGGACAACGTTACTCATGCGACAGGCATTAAGTTAGGTCAGTTCCTTGAAGCTTACCCTGACCCAGATAGCGGAAAAGCTGTGCTGATTATTAAGCCTGGCAGCTTCGCAAGACCAACCGCGCCTTCAATGCTTGCTTACTTAGAAGACCCTGTAGACGTCTATGGTAAGATTGGCACGCGTGAGCGTATCCATGCGGGCGGTATTTGGTGCGGGGATGTGGTATATTCAGATCCATCCTTGATCCCAATGTATCGTAAGGATAAAGCAATTGGCTTACAAGAATACGACGGCTTAGACCCTAACGTTACAGGTGGCGATCAGTTCTTGCTAGGCGCAATTGTAAATCTTAACGGTAACGCTCCGGATGACGGTTCAGTTCGCGTTGAGTGGTACGATATCACAATTGGCGAAGTAGCGCGCGACATGGAAGGCAATATGTTAGCGGTTGAGCGTAGCTATAAAAAGGGCGACGAGTTAACCCCTGAGCATAACCCGTTATTGTTGCTTGGCGTTGTTGCCACAAAAGGCTTGGAGAAATACCGCTTAGTTGTTACCGATAACTTTGCTGACGACGTGTTGCGAGTGCAAGACTACACTAGCGGCCCTACTGGTATCATTGCGCAGTCCCTTTCGGGTAACTCAAAAGCCAGCGCGGCGTTAACTCAATTCGCTGAAGACACTGGTTTTGACATTCGCCCTGAAGTGCGTTACCTAGGCGCGGCGCGTGCAAGTATGGATATTTATGCAGCGCAAGACGCGCAGCCTTACGAGTCTGACGCGGGTATGGTTGCAACGTCCGCGACTGGGTTTGCAATTGAAACTCTATCAAAGATTAATACTCGTGTAGAAAACGAATGTTTAATTATTGAAAGCGCAGACTTAACACTGAGCGACATGATGCTTAAGTTTGTGTTTAGCAATATAGAGACAACTATGTTACGCGGTAAGCAAGTGAATGTTCCAATCACGCTTATGAATAAAGATAGCGCGTGGAACGTGGGTTTGTTTGCGTGGGTTGGTGCTGCGGACGCCTTTGGTCGAATCTATAATGGTCGCAACGGCTCTGACTTGTCGTTGAACACGGGTTGGCGTTTAGCAGACTCCGATTTCATTAGTGAAGAGGTTGTGCAAGGTGAACACGATATAGGCTTTACGTTTACCGTACCTAAGGACGCAGTTAATTACGCGATAGGTTTGTGGCCATCTGATCCGCGTAACCCACTGCACATTGAACTGAAGCACATGGGGGTTGACGTTGCTGTTCCGTTTTGGGGTTATTCACTTAACGCGCCTAAAATTAAAGATCTATCTTATCTTCGTGAGTTAGGCATTACCGCCGTATTTGTTCAAGATACGCAAGGTAACGCGGGTCTAAGATATACACTTGGTGATAGTGCGGGGGGTAACCCGTTGCCGTTAGGTATTAATCAGCATAAATTGCCGTCAGTGTTTAGCTTTGACACTTCGATGAACGTTGTTAACGGTAGTAGCGCGAGCGGCGGCGAAGGTGCTTTAGTGTGTAACGCGTCGGGTCAGTTAACGCTCCAATTTGATTTGAGTTTATGGAGCGAGCAAAAGGTTGACACCACTGCGTCATTTTGGGTGGTGCGTTTTGACGCTGACGGAAATGCTGTCGCGGTTAGTACGTTGCAGACGTTCCCAGTTAAAGCGGGTTCAGTTAACGTGAACCGTCAAACCGCCCCGATTACAATCGATGTAATGGCGGGCGATAAGTTGGGCTTGCGTGGTTCATCTAACATCGCAGACGGTGCGTTTTTGGAATGCAACAATAATGCTCAGCCTTTGGTTAAAACATTCGCAACGTTCAAGGAATCAACGCGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e7cccd4e191a3a386d3f80bd352e97461b3bacfc953155003e5f178269d9145e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4842
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophage, pVco-14, infecting Vibrio corallilyticus Kim,S.G., Kim,H.J. and Park,S.C. 2015-11-24 — GenBank