Protein

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Genbank accession
YP_009793777.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MEFPIKLETGVTLTAAKDPVWGDRDGTFINCVVTLEGGPFEEPTEVPFTATPTDYMAHGRDLFDYFKDSAGPWVRPDVTIEDLQADFDKIWPDVMLGLADQATIDLAKNLRVQIKAMS
Physico‐chemical
properties
protein length:118 AA
molecular weight: 13136,73190 Da
isoelectric point:4,23771
aromaticity:0,10169
hydropathy:-0,17881

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Pf1 ERZ-2017
[NCBI] 		2761363 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Ghunavirus
Host Pseudomonas fluorescens
[NCBI] 		294 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009793777.1 [NCBI]
Genbank nucleotide accession
NC_047874.1 [NCBI]
CDS location
range 35509 -> 35865
strand +
CDS
ATGGAATTTCCTATCAAGCTCGAAACAGGGGTGACCCTGACTGCCGCAAAGGACCCCGTATGGGGCGACCGTGATGGCACGTTCATCAACTGCGTGGTGACTCTTGAAGGCGGTCCTTTCGAGGAACCTACTGAAGTTCCGTTCACCGCAACACCGACAGACTACATGGCTCATGGCCGCGACCTGTTCGATTACTTTAAGGACTCTGCGGGACCGTGGGTTCGCCCAGATGTCACCATCGAAGACTTACAAGCTGACTTCGACAAAATCTGGCCCGACGTGATGTTGGGTCTGGCCGATCAGGCAACCATCGACCTCGCTAAGAATCTGCGCGTTCAGATCAAGGCGATGAGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9268340a9a75ee48331e3b1ebbc196d2ce67595b8751f4f063d80bb261e8dd8e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6651
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Antibacterial composition for extension of chilled fish shelf life and decreasing of risk of food-borne infections, bacteriophage strains for its preparation Zulkarneev,E.R., Aleshkin,A.V., Rubalsky,O.V., Kiseleva,I.A., Rubalskii,E.O. and Lebedev,S.N. 2019-10 — GenBank