Protein

View in Explore
Genbank accession
GENB_9200f5a16a4c [GenBank]
Protein name
receptor binding protein
RBP type
TF
Evidence RBPdetect
Probability 0,67
Protein sequence
MPTITVLVAPEVVRNKPETERNHVVTGVAKGWQKTSLNQDPDEILTECKGLDALLTKSNLQADGVTKVDPTKPIGFQVSYEIHDPNAILTTGLVITPATASGEIGQFVELLATVSPANATYQGVNWYSGDLTKAIHIGGGKFKLLQSGSVTVYGVTVEGNHTDSTVITIAGLLSLTTDLAASQDVADGADATFTIVAAGGTTPYSYAWYYSDTPGGEGVVIDAGVNPTAATASLVNHAVTAASEGEYWCVVEDADGHSVTSARCELAVV
Physico‐chemical
properties
protein length:269 AA
molecular weight: 27952,85740 Da
isoelectric point:4,48064
aromaticity:0,06320
hydropathy:0,06952

Domains

Domains [InterPro]
DC_0078
STR
1–207
DC_0078
G3DSA:2.60.40.1080
STR
87–170
G3DSA:2.60.40.1080 IPR013783
IPR007110
STR
164–260
IPR007110
IPR036179
RBD
181–268
IPR036179
GENB_9200f5a16a4c
1 269
Architecture
STR
STR 1-268 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Se-B
[NCBI] 		2700089 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
MN871491.1_CDS_[complement(58613..59422)] [NCBI]
Genbank nucleotide accession
MN871491.1 [NCBI]
CDS location
range 58613 -> 59422
strand -
CDS

  




        

        
      
    
  






  

  
  

    
Genome Context

  


  

    

      
Genome Context

      

    

  


  

  


  

  

  
  

  


  

    
Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
c6d9db2b11ad6896f26d8636e510d67dc4970aeda99712553b4ce82ed150bc1e

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,7281
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50