Protein

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Genbank accession
WNV47112.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,81
Protein sequence
MSKVIKVTYGDNILSDLFESVTNIKRDIGSGWNNNTQAKKEGVDVITSSRGPRNISFDYLIKGTFFSEINANKQKLASYINSEDTLGLVFEDEPNKVWYALPDGEQSYEPESNKGTLTFLVPSGHAVSSFTNVLNLSNSGGANGTITPSTVDGSVTAVIKNKGTLPAWLRFKIKCSQENGYIGIASPTGAFEMGNIQEADGVVKPESEYLYDSKDDTSFTKFKDVAAGTVNPQNNWLATNGKLEFQTDGLRLKDQGTVGSNQGVAGGMKVMTLPADSNGHVGAVNFYSYFNLFAWATAFGQTGVLQVLFTDANDKLVAGYGIIKGDLVGNKAMMKAWVGGNNPREIASRDFIANNGEGNGAGTMNNDQFNERNGSTDFEKKGANFGFYWKGSRLPAYVPELENVEISKVYLYIGQYPNSNKFMGNLSIRNISCRKDNVSVWRDVPNRYAANSETKINMGEGSILVNGISSLTEMINGSNFFMIPPGETTIVTNPSNWVNHPLEIEYSWEENYL
Physico‐chemical
properties
protein length:513 AA
molecular weight: 56076,85890 Da
isoelectric point:5,11292
aromaticity:0,10526
hydropathy:-0,39630

Domains

Domains [InterPro]
G3DSA:2.40.30.200
ATT
1–127
G3DSA:2.40.30.200
DC_0420
STR
2–513
DC_0420
IPR008841
STR
6–121
IPR008841
IPR006520
Unmapped
8–126
IPR006520
WNV47112.1
1 513
Architecture
ATT
STR
ATT 1-127 | STR 128-513
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNV47112.1
1 513
Domain Start End Length (AA) Confidence
N-terminal 1 206 206 0,9729
Central domain 207 405 200 0,3329
C-terminal 406 513 107 0,5009
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-206
Central
207-405
C-terminal
406-513

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage D7893
[NCBI] 		3077244 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus lactis
[NCBI] 		1358 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNV47112.1 [NCBI]
Genbank nucleotide accession
OR480988.1 [NCBI]
CDS location
range 32507 -> 34048
strand +
CDS
ATGAGCAAGGTTATTAAAGTTACTTATGGAGATAACATTCTTTCAGATTTGTTCGAAAGTGTCACTAACATAAAACGTGACATCGGCTCAGGCTGGAATAATAATACGCAAGCTAAAAAAGAAGGCGTTGATGTTATCACATCATCTCGTGGGCCAAGAAATATCTCTTTTGATTATTTGATAAAAGGAACATTTTTTAGTGAGATAAATGCAAACAAGCAAAAGTTAGCAAGTTATATCAATTCAGAAGATACCTTAGGCTTAGTTTTTGAAGATGAGCCAAATAAAGTCTGGTATGCATTGCCAGATGGAGAACAATCCTATGAACCAGAATCAAATAAAGGAACACTAACCTTTTTAGTTCCTTCTGGTCACGCAGTTTCAAGCTTTACAAACGTCCTTAATTTATCTAACTCTGGTGGAGCAAATGGAACAATTACTCCTAGCACAGTTGATGGTTCAGTAACAGCAGTTATTAAAAATAAAGGTACACTTCCAGCTTGGTTACGTTTTAAGATTAAATGTAGTCAAGAAAATGGATATATCGGTATTGCAAGTCCAACTGGAGCATTTGAAATGGGGAATATCCAAGAAGCAGATGGAGTTGTAAAACCTGAAAGTGAATATTTATATGATAGCAAGGATGACACATCGTTTACTAAATTTAAAGATGTTGCAGCTGGAACTGTTAACCCTCAAAATAATTGGTTAGCCACGAACGGAAAGCTTGAATTCCAAACTGATGGGTTGAGATTAAAAGATCAAGGAACTGTTGGTTCTAACCAAGGAGTAGCTGGTGGTATGAAAGTAATGACTTTACCAGCAGATTCAAACGGTCATGTTGGAGCAGTTAATTTCTATTCATATTTCAATTTATTTGCTTGGGCCACAGCTTTTGGACAGACTGGAGTTTTGCAAGTTCTATTCACTGATGCCAACGATAAATTAGTCGCCGGATATGGAATCATAAAAGGAGATTTGGTTGGAAATAAAGCAATGATGAAAGCATGGGTTGGTGGTAACAATCCACGGGAAATCGCCAGCAGAGATTTTATCGCAAACAACGGTGAGGGAAATGGCGCTGGAACTATGAATAATGACCAATTTAACGAAAGGAATGGGAGTACTGATTTCGAAAAGAAAGGCGCGAATTTCGGATTTTATTGGAAAGGTTCAAGATTACCGGCTTATGTTCCCGAGTTAGAAAATGTTGAAATTTCAAAAGTCTATTTATATATTGGACAATATCCAAACTCCAATAAATTCATGGGTAATTTATCTATAAGGAATATTTCTTGTAGAAAAGACAATGTGAGTGTTTGGCGAGACGTTCCTAATCGTTATGCAGCTAATTCAGAAACAAAAATAAATATGGGGGAAGGAAGCATTCTTGTTAATGGTATTTCTTCATTAACAGAAATGATTAATGGATCAAACTTTTTTATGATTCCACCAGGAGAAACCACAATCGTTACTAATCCTTCAAATTGGGTTAATCATCCGCTTGAAATTGAATATAGTTGGGAGGAGAACTATTTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
56bec2a16d906a50e19efbd8bcde80b482c58915674cf419eac5155d3b1b7901
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8642
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50