Protein

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Genbank accession
XSD92492.1 [GenBank]
Protein name
tail fiber protein proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,50
TF
Evidence RBPdetect2
Probability 0,60
Protein sequence
MSDLLKQHFRATNGLDAGGNKVINVALADRNVKTDGVSVEYVIQENTIQKYDPTRGYLTDFAVTYGRRIWIANKDIPKPAGEFNQANWTSLRVDPNWIYTVRKGEFEIQSGQFINVDSNAAGNATLLLPLAPDEGDTIVVRDIGGRPGYNGILIKAQDTGASIVFGESRLREVRLTRPYSQIMLTFSNGAWRASLTDFGDTAKMVVPNGIVPTQVQSGDNVVRRYTSNSEIFITLPLFANSNDIINFTDLDGTSPINHMTVRTFDPTISIGTPGQTEIQVRTSGSGFLVYDAIDKIWRIFENDLRTRVRIITSDVTLMPNEHISVFGADNSTVKTINITLPTDVAVGDTVKIAMNYMRKGQTVVIKASDGDTIASNLNLLQFPKRSEYPPDAAWVQSSSITFNGTTSYVPVLELAYIEDKASGKSYWIVTESDPTVERVDAKDNTTRARLGVIALATQAQANAESNPEKELAITPETLNGRRSTETQTGIARIATSGEVNQATTASYLDNVIVTPKKLNERSATETRRGLAEIASNAKMDAGTDDFTIVTPKKLLYRTTSDSRLGVIQLVKTGGAPNTTADRSSAGTGIFDHSDYKNAVTPKTLREYKATVNQSGIVWLASDSEVRNGTPASSNIPTVVTPESLHKKVATDGAIGLIQIATQTEVNAGGVTNKAVTPKTLNDRTATNDRTGIARFATPGAQGEFEAGTSSTVMVNPKLLFDKFANTDRIQVNTSSGLTITGNLWDHYTINIQEASTSQRGTTTLATAAEVRSGTDAKKIVTAATLHAKTATEGAIGLAQYATQAQVDAGTLSDRIVPPAYLKQTIQVTESWQATDSVRGTVRLSTGDGTWKGNDTNGSTLPDNGYASKGVAVSPYELNLTLKHYLPRLGKAYDTGMLGGQTPDKYARRDIAQTISGAWTFSQDTVFNNNISVQNILYANGGEVKISPTADTGNAHVRFQNRDGTERGIIYAETQTASAGNLKVRVKNGTGTTAASQTYTFGGNGTLDVPNEVSTKTLRSSGNTIVGGTVMVKDTVLLTIETQNAIIGARSHSAFIDTRDADTQIFARDNTNSYPILTTKNYARLADGRYVKKAGDTMTGNLNINSSAIVITGSESWYVPTNDTVLRQGSWTAEIKDATKLKGLRGYMVPIRTPIDPANPSTLVVTGYEEKTAAGGVLTQVGVTTNNTYQLWTPYPPTTETADKRFAHTVWMRIYNPNLNKFDDWMRVFTSATPPTAADIGAPSSVSTQVKTLEVLEWIKLGPVKIWPDRPNQTLKFEWVGD
Physico‐chemical
properties
protein length:1281 AA
molecular weight: 138695,50040 Da
isoelectric point:6,88749
aromaticity:0,07104
hydropathy:-0,34598

Domains

Domains [InterPro]
DC_1986
ATT
8–137
DC_1986 DC_1209
IPR048391
ATT
1127–1228
IPR048391
XSD92492.1
1 1281
Architecture
ATT
STR
ATT
STR
ATT 8-137 | STR 348-1126 | ATT 1127-1228 | STR 1229-1270 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XSD92492.1
1 1281
Domain Start End Length (AA) Confidence
N-terminal 1 842 842 0,8597
Central domain 843 1041 200 0,2326
C-terminal 1042 1281 239 0,6530
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-842
Central
843-1041
C-terminal
1042-1281

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_Kpl_K65_evo5
[NCBI] 		3412900 Viruses >
Host Raoultella planticola K59
[NCBI] 		1212665 Ascomycota > Pichiomycetes > Serinales > Metschnikowiaceae > Clavispora >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XSD92492.1 [NCBI]
Genbank nucleotide accession
PQ569698 [NCBI]
CDS location
range 109351 -> 113196
strand -
CDS
ATGAGCGATTTACTGAAACAACATTTCCGTGCAACGAACGGCTTGGACGCAGGCGGAAATAAAGTTATAAATGTGGCACTAGCTGACCGCAACGTTAAAACCGACGGCGTCTCTGTCGAGTACGTTATTCAAGAAAACACTATCCAAAAATATGACCCGACGCGTGGGTATCTCACCGATTTTGCTGTGACTTATGGACGACGCATTTGGATTGCAAACAAAGATATTCCAAAACCAGCCGGAGAATTTAATCAGGCCAATTGGACTTCTTTACGTGTTGACCCGAACTGGATTTATACCGTCCGTAAAGGAGAGTTTGAAATTCAATCTGGTCAGTTCATCAACGTTGACTCGAACGCTGCCGGTAATGCTACACTACTTCTTCCGTTAGCACCAGACGAAGGCGATACCATTGTAGTTCGTGATATTGGAGGTCGTCCTGGCTATAACGGAATCTTAATTAAAGCACAAGATACTGGTGCGTCTATCGTATTTGGTGAATCGCGTCTGCGTGAGGTAAGACTTACTCGTCCGTATTCACAAATTATGCTTACGTTTAGTAATGGTGCATGGCGTGCTAGTTTAACCGATTTTGGCGATACTGCTAAAATGGTAGTTCCGAACGGGATTGTTCCAACCCAGGTACAGTCAGGTGATAACGTAGTTCGTCGTTATACTTCCAACTCAGAGATTTTTATTACTCTGCCGTTGTTCGCTAATTCAAACGATATCATTAATTTTACTGACCTTGATGGTACATCGCCGATTAACCATATGACTGTGCGTACGTTTGACCCAACTATCTCAATTGGGACTCCTGGACAAACGGAAATTCAAGTACGTACTTCAGGTAGTGGATTTTTGGTGTATGACGCTATTGACAAAATATGGCGCATCTTTGAAAATGATTTACGTACCCGAGTAAGAATAATTACTTCTGACGTTACTTTAATGCCTAATGAGCATATTTCTGTATTTGGCGCAGATAATAGTACAGTTAAAACAATTAACATTACTTTACCTACTGACGTAGCTGTTGGGGATACTGTCAAAATCGCAATGAATTATATGCGTAAAGGACAGACAGTAGTAATTAAAGCTTCTGATGGTGATACCATCGCTAGTAATTTGAATTTACTGCAGTTTCCAAAACGCTCAGAGTATCCACCTGATGCAGCATGGGTGCAATCAAGCTCGATTACCTTTAATGGAACTACGTCATATGTTCCTGTTCTTGAGCTTGCATATATTGAAGATAAAGCATCCGGAAAAAGCTATTGGATTGTAACTGAATCTGACCCTACTGTAGAACGTGTTGATGCTAAAGACAATACTACCAGAGCACGATTAGGTGTTATTGCTCTTGCTACGCAAGCTCAAGCCAACGCGGAGTCAAATCCAGAAAAAGAATTAGCAATTACTCCAGAAACTTTAAATGGACGTCGTTCTACTGAAACTCAGACTGGTATAGCAAGAATTGCAACTTCCGGCGAAGTTAATCAGGCAACAACTGCTTCTTACTTGGATAACGTAATCGTTACTCCTAAAAAGCTTAACGAAAGATCTGCTACTGAAACTCGTAGAGGTTTAGCTGAAATTGCGTCTAATGCTAAAATGGATGCAGGAACAGACGATTTTACAATTGTTACTCCTAAGAAGTTGCTTTATCGTACTACGTCGGATTCACGGTTAGGTGTTATTCAGTTAGTAAAAACTGGTGGTGCTCCTAACACAACTGCTGATCGTTCTTCTGCTGGCACCGGTATATTCGATCATTCTGATTACAAAAATGCAGTTACTCCAAAAACTCTTCGTGAGTATAAAGCTACTGTAAATCAGTCAGGAATAGTTTGGTTAGCAAGTGATAGCGAAGTTAGAAACGGAACTCCTGCTTCTTCAAATATTCCTACGGTTGTTACACCAGAATCTTTGCATAAAAAAGTTGCTACTGATGGAGCAATTGGTTTAATCCAAATAGCTACACAGACAGAAGTTAATGCTGGCGGCGTGACCAATAAAGCAGTTACACCTAAAACATTAAATGACCGTACAGCAACTAACGATCGTACTGGTATTGCTCGCTTCGCGACACCTGGTGCCCAGGGTGAATTTGAAGCTGGTACTTCAAGTACAGTAATGGTAAACCCTAAATTACTGTTCGATAAATTTGCTAATACTGATCGTATCCAAGTTAATACTAGTTCTGGCTTAACTATTACTGGGAACCTCTGGGACCATTATACCATCAACATACAGGAAGCAAGTACTTCCCAAAGAGGTACAACCACTCTTGCTACTGCTGCTGAGGTTAGAAGCGGCACCGACGCCAAGAAAATAGTTACTGCTGCCACGCTACATGCTAAAACAGCAACCGAAGGAGCTATCGGTCTTGCTCAGTATGCTACGCAGGCACAAGTTGATGCAGGCACATTAAGTGATAGAATTGTTCCTCCTGCTTACTTGAAACAAACTATTCAGGTAACAGAGTCATGGCAAGCTACAGACAGCGTTAGAGGGACCGTCAGGCTATCTACAGGCGATGGAACGTGGAAAGGTAATGATACCAATGGCTCAACTCTTCCGGATAACGGGTATGCCTCTAAGGGCGTCGCAGTGTCTCCGTATGAATTGAACCTCACGTTGAAACATTACTTGCCTCGTCTTGGTAAAGCGTATGACACCGGAATGCTAGGTGGTCAAACCCCAGACAAATATGCTCGTCGCGATATAGCGCAGACAATTTCTGGAGCTTGGACATTTAGCCAGGATACTGTGTTTAATAACAACATTTCTGTCCAGAATATTTTATACGCTAATGGTGGCGAAGTAAAAATTTCTCCAACTGCTGACACTGGAAATGCGCATGTTCGTTTTCAAAATAGAGATGGAACTGAACGCGGTATAATTTATGCAGAAACCCAAACAGCTTCAGCTGGAAATTTAAAAGTTCGTGTCAAAAACGGAACAGGAACTACTGCTGCAAGCCAGACCTACACATTTGGTGGAAACGGCACGCTGGATGTTCCTAATGAAGTATCAACTAAAACTCTGAGGTCTTCTGGAAATACAATAGTTGGCGGAACTGTTATGGTAAAAGATACGGTTCTATTAACTATTGAAACCCAAAATGCTATTATTGGTGCTAGGTCTCACTCTGCGTTTATTGATACTCGTGACGCTGATACGCAAATTTTTGCTCGAGATAATACTAACTCGTATCCGATTTTAACTACCAAAAACTACGCAAGATTAGCTGATGGTCGTTATGTCAAGAAAGCTGGTGATACCATGACCGGCAATCTTAACATAAATAGTTCGGCTATCGTCATTACAGGTTCTGAATCGTGGTATGTGCCGACTAATGATACTGTATTGCGACAAGGTTCTTGGACTGCTGAAATTAAAGACGCTACTAAATTGAAAGGTCTTCGTGGTTATATGGTTCCAATCAGAACACCGATTGACCCTGCTAACCCAAGCACTTTAGTAGTGACCGGATATGAAGAAAAAACTGCTGCTGGCGGTGTTTTAACTCAGGTTGGTGTAACTACAAACAATACTTATCAGCTTTGGACACCTTATCCTCCAACAACCGAAACTGCCGATAAGCGTTTCGCGCATACTGTGTGGATGAGGATTTATAATCCAAACCTTAATAAGTTTGATGATTGGATGCGAGTGTTCACGTCTGCTACTCCTCCAACTGCAGCTGATATCGGAGCTCCAAGCTCAGTATCAACTCAGGTTAAAACACTTGAAGTTTTGGAGTGGATTAAGCTTGGCCCAGTTAAAATCTGGCCAGACCGTCCAAACCAAACTCTCAAATTTGAATGGGTAGGTGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
35f13b7c3e3be7eaa4f393308218fdbdd5baf27714c8332d9417e09c1ca250d6
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2783
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50