Protein

View in Explore
Genbank accession
QPD96331.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MISGNKGGSSKPYTPKEMEDNLISINKIKILLAVSDGEVDGEFSLKNLYLDDVPVQNADGSLNYSGVSAEFRPGTQTQDYIKGFSDTSSEITIQRDLAQDNPYNIAVTNKSLSAIRIKILMPQGYKQEDNGDLVGVSVQYAVDMAVDGGSFQRVLTDTITGKTTSGYDRSQRIDLPAFNEQVILRVSRITADSTSSRVVDAIRLQSYAEVVDAKFRYPLTGLVYVEFDSELFPTQLPNISIKKKWKLIKVPVNYDPDSRTYSGSWNGLFKTAWSNNPAWVLYDLITNQRYGLDQRELGIEIDKWSIYEAAQYCDQMVPDGKGGLEPRYLCDVVIQSQIEAFNLIRDICSIFRGMSFWNGESLSIVVDKPRDPSYIFSNDNVVNGDFQYTFASEKACTRSAT
Physico‐chemical
properties
protein length:401 AA
molecular weight: 44869,83900 Da
isoelectric point:4,78632
aromaticity:0,10224
hydropathy:-0,34589

Domains

Domains [InterPro]
DC_0014
STR
1–401
DC_0014
IPR053171
Unmapped
2–395
IPR053171
IPR055385
ATT
88–213
IPR055385
QPD96331.1
1 401
Architecture
STR
ATT
STR
STR 1-87 | ATT 88-213 | STR 214-401
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPD96331.1
1 401
Domain Start End Length (AA) Confidence
N-terminal 1 400 400 0,9220
Central domain 401 400 1 0,2843
C-terminal 401 401 0 0,0000
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-400
Central
401-400
C-terminal
401-401

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage N5822
[NCBI] 		2777323 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterobacter cloacae
[NCBI] 		550 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPD96331.1 [NCBI]
Genbank nucleotide accession
MW032452.1 [NCBI]
CDS location
range 27020 -> 28225
strand -
CDS
ATGATAAGCGGCAACAAGGGCGGCTCCTCTAAGCCGTACACGCCAAAGGAGATGGAAGATAACTTGATCTCCATCAACAAGATCAAAATCCTCCTTGCGGTTTCAGACGGCGAGGTTGACGGCGAGTTTTCGCTCAAAAACCTTTATCTCGATGATGTGCCAGTGCAAAACGCAGACGGCTCATTGAACTATAGCGGGGTTAGTGCAGAGTTTAGGCCAGGCACTCAAACGCAGGACTACATCAAGGGGTTCTCCGACACGTCAAGCGAGATCACAATTCAGCGCGACCTGGCGCAAGATAACCCTTACAACATCGCAGTTACAAACAAATCACTCTCAGCTATCAGAATTAAAATCCTGATGCCTCAGGGCTACAAGCAGGAGGATAACGGCGATCTGGTTGGTGTATCAGTGCAATACGCGGTTGATATGGCTGTAGACGGCGGCTCATTCCAGCGAGTTCTGACTGATACGATCACTGGCAAGACAACAAGCGGCTACGACCGCAGCCAGCGCATCGACCTGCCAGCATTCAACGAGCAGGTGATTTTGCGCGTAAGCCGAATCACGGCAGACTCAACTAGCAGCCGAGTTGTTGACGCTATCAGATTGCAGAGCTATGCGGAGGTTGTTGATGCAAAATTCCGTTACCCTCTGACTGGTCTGGTTTACGTTGAGTTTGATAGCGAGCTTTTCCCGACTCAGTTACCGAACATTTCTATCAAGAAGAAATGGAAGCTGATCAAGGTTCCAGTTAACTATGATCCAGATTCACGCACCTATAGCGGATCATGGAATGGTTTATTCAAGACGGCTTGGAGCAATAACCCTGCTTGGGTTCTGTATGACCTGATCACCAATCAGCGCTACGGACTCGACCAAAGGGAGCTTGGGATTGAGATCGATAAGTGGAGCATCTACGAGGCGGCGCAGTATTGCGATCAGATGGTTCCAGATGGTAAGGGCGGCCTAGAGCCTCGCTATCTTTGTGATGTGGTTATCCAGAGCCAGATTGAGGCGTTTAACCTTATCCGCGATATTTGCTCAATCTTCCGTGGTATGAGCTTTTGGAACGGCGAAAGCCTTTCTATCGTGGTGGATAAGCCGCGCGATCCGTCTTACATTTTCAGTAATGACAACGTAGTAAACGGCGATTTTCAGTACACATTTGCGAGCGAAAAAGCATGTACACGCAGTGCAACGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3f5e2d150f2ddc352ca7c400a13c9393567d9b02cb47287b52c56e81418d5d7f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8957
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The prospects of a novel, highly virulent, biofilm dispersing bacteriophage isolated from environment for controlling Enterobacter Cloacae in clinical medicine Nair,A., Vyawahare,R. and Khairnar,K. 2019 — GenBank