Protein

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UniProt accession
A0AB39CCJ5 [UniProt]
Protein name
Virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 0,58
Protein sequence
MNEYLLRYAIDNVWCNLGMDRQFQYQLRQLTPKYGTRRYYTVDGDRYDLPFENERDWFHVYQIGQVVPSHLALPKTYNKWMSLEELANKHKMLGEIYVDAGIQYSRANTWVLITHNQNLLVCAKILPLFPDLDEHQPYIHFYQNAFWQSKRSNDKENFIEARSLRPATTAALRQFQIQLSDRLAQVPGGIPLCWVNGRLVHEISLVTAGAGDYCEWVLDTSIYRVAEYRLGGTPTFTSTLDQSNKYLIHLPKDKSVSTIEFHDDLAVFLCKNDNARARYSGVHYHHNDGKWMRQLTHRDWSVPVGKVQSLIAAHPEDPRHPSNPQVWPSDKWATSDPMYLRVYHRRSGYERPIVAESSRIQELYRLKDTDIVRAMTGADSIPVWHAANLEKAPYVRFMSAKPEVIYPITFGDPNKTNQAKKDAQKFAGDVFGYHESAHILADNPAKVVQGQNFRYADLAYVYWQNATVFEFDDKGVLLEWHYHTGGSRYYVVNQKCAWVEAITGVGSTDLQGAYGVNPVEITGNYGFRVYVNPVWGGEPTGEWKDITDLPNRHEWGFLDETGDTPVWRWTADPKKWLGLVRKADRFFMDVRRFNKGDGMIRFSFRHVSTASGQPTEELMDVPFGQFDLFLADENGENGRPLIEDLDYVIIPGKTFRETQVVLCNLEYLNDINTLILRGHGFCSPELTLYKPTEFGFVEYGVLSGNGVYDLHTHKVQRIVVDGHYRAFSDVKFEEDYGTLVINDERNGAPYQIQTPQVAFRDVYDPNSIARKEDDERDKQVSDYMTEYFPQRPRTTSDKIKTQYHVFSAYTNKILHDLQKGILKPPLVNGRYTDMDIQKAVARYEWMKPFDILNRDYNHNHVVVYPHWHPTAQGLDIQQYDFFVRVLKLNLREMPELSQYIIITRT
Physico‐chemical
properties
protein length:905 AA
molecular weight: 105150,24420 Da
isoelectric point:6,22571
aromaticity:0,12928
hydropathy:-0,53713

Domains

Domains [InterPro]
IPR055617
STR
2–903
IPR055617
A0AB39CCJ5
1 905
Architecture
STR
STR 2-903 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0AB39CCJ5
1 905
Domain Start End Length (AA) Confidence
N-terminal 1 257 257 0,5174
Central domain 258 456 200 0,6255
C-terminal 457 905 448 0,3358
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-257
Central
258-456
C-terminal
457-905

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage RVTF4
[NCBI] 		3236931 No lineage information
Host Pseudomonas sp.
[NCBI] 		306 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
18ed8ab37d961c93bbd420fe927b70c3621c5d3a5858a963bc79b921086e62c3
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3102
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50