Protein

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Genbank accession
XRM22886.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,91
Protein sequence
MNVKGGAVAPPDYTLPLRAYASNQERNRNVFTLYDAIPVGGICQVLPGSGACDGFGAVTGDYRAGEAVTQRMEQPGFTGPQGLNATAVTAGCFTLILQRVGRGAFAVADCAVTEDDADKLTVGTGAHNGHAVIDNHTVALIGGEHGVVVSVTDEVNEVSFARLAVYEAVHRNSTQHFTSRTHQRVAHGLGGVDKGTCIEAQGGGHINNHIILGMVFVGRSDVIVVQAESGCNQTTLRLALPEVIQAISYGLQRVLAGQFNGQVGLSEAFVQVRYARHHLASLHVTRGSDVLVHVVRVVRLDRSVDGFPERDVSQVGRAASNFGSIRSRGKNAGFKESCFLYRVLCHIGQQDGFVTGYDIANSGNSHYYFLRASSCRLNSAGLVRCNSRRSASVISLNIFAAPPPLPPEAPPPEAALALIKWLNALCSRRYLRNCSGSVVITLPSGPTNLVTTSSPSNSVRTNGARMSTASGVIKSPAKLPRTALRSLPSTRLASTEYFSSFSFSTGSYWLRIVFSNSSILPADFSASWCASWRASSASFALRAASFFSVNNASLLAFKPATSFSTASAIICCTCSAVKVVAPPAGLASSPASFMSGKRKKRFIVSMSPGR
Physico‐chemical
properties
protein length:610 AA
molecular weight: 64596,59300 Da
isoelectric point:9,56590
aromaticity:0,07705
hydropathy:0,05426

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRM22886.1
1 610
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0158
Central domain 11 408 399 0,7498
C-terminal 409 610 201 0,1401
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-408
C-terminal
409-610

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SaI_NFG_5577
[NCBI] 		3378339 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Infantis
[NCBI] 		595 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRM22886.1 [NCBI]
Genbank nucleotide accession
PQ488694 [NCBI]
CDS location
range 1931 -> 3763
strand +
CDS
ATGAATGTGAAAGGAGGGGCCGTAGCCCCTCCTGATTATACGCTACCGTTACGCGCCTACGCCAGTAACCAGGAACGCAATAGGAACGTGTTTACGCTCTACGACGCGATTCCAGTTGGTGGCATTTGCCAGGTCTTGCCAGGAAGCGGAGCGTGCGATGGTTTCGGAGCCGTTACCGGTGATTACCGCGCTGGTGAAGCTGTAACCCAGCGGATGGAGCAACCAGGTTTTACGGGTCCACAGGGTCTCAACGCCACCGCCGTTACCGCGGGATGCTTCACGCTCATACTCCAGCGGGTTGGTCGGGGTGCCTTCGCCGTAGCCGATTGCGCCGTTACCGAAGATGATGCTGATAAACTTACGGTCGGTACCGGTGCCCACAACGGTCATGCTGTCATCGACAACCACACGGTAGCCCTGATAGGTGGCGAACATGGTGTTGTTGTCAGCGTCACGGATGAAGTCAATGAGGTTAGCTTTGCGCGCCTGGCCGTATACGAAGCTGTGCATCGCAATAGCACCCAGCACTTCACCAGTAGAACCCATCAGCGCGTCGCCCATGGTCTGGGTGGCGTCGATAAAGGCACCTGCATCGAAGCCCAGGGTGGCGGACACATCAACAACCATATCATTCTGGGTATGGTATTCGTCGGTCGCAGCGACGTTATCGTTGTACAGGCCGAGAGCGGTTGCAATCAGACGACGCTGCGCCTGGCGCTGCCAGAAGTTATCCAGGCGATTAGCTACGGATTGCAGCGGGTTTTGGCTGGTCAGTTCAACGGTCAGGTCGGCCTGTCCGAAGCCTTCGTTCAGGTACGCTACGCGCGCCATCATCTCGCCAGTCTGCACGTTACGCGGGGTAGCGATGTCCTGGTACACGTCGTTCGAGTAGTTAGGCTCGATAGAAGTGTCGATGGCTTTCCAGAACGGGATGTTAGCCAGGTTGGACGAGCCGCGAGCAATTTCGGCAGCATACGGAGTAGGGGTAAGAATGCCGGATTCAAAGAAAGCTGTTTTCTCTACCGGGTCCTGTGTCATATAGGACAGCAGGACGGGTTCGTTACCGGTTACGATATCGCCAATAGTGGTAATAGCCATTATTATTTCCTCAGGGCTTCAAGTTGCCGTTTAAATTCGGCTGGATTAGTGCGGTGCAACTCAAGGCGCTCCGCTTCGGTCATTTCACTAAACATTTTCGCGGCCCCGCCGCCTTTGCCACCGGAAGCCCCGCCACCGGAAGCTGCATTAGCCTTAATCAAATGGCTGAATGCTTTATGTTCACGCAGATACTTGCGGAACTGTTCCGGGTCAGTCGTAATCACGTTACCGTCTGGACCGACGAATTTAGTAACTACGTCATCACCTTCAAATTCTGTACGAACAAACGGCGCCAGGATGTCTACAGCTTCCGGCGTAATAAAATCCCCAGCGAAGCTGCCAAGAACCGCTTTACGCTCGCTGCCGAGTACACGGTTAGCCAGCACGGAATACTTCTCTTCTTTCTCTTTCAGTACAGGTTCATACTGGCTACGAATCGTCTTTTCGAACTCGTCCATCTTGCCTGCCGACTTTAGTGCTTCCTGGTGCGCCAGTTGGCGTGCTTCTTCAGCTTCTTTCGCCTTGCGCGCCGCTTCTTTCTTCTCGGTCAACAACGCTTCATTATTGGCCTTCAAGCCTGCCACTTCTTTCTCGACAGCTTCAGCAATCATCTGCTGCACTTGTTCTGCCGTGAAGGTGGTAGCGCCGCCTGCTGGTTTAGCTTCTTCGCCCGCTTCGTTCATGAGCGGAAAACGTAAAAAACGATTCATAGTCAGTATGTCCCCTGGACGTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
71c79178021f956202aa3d6d4200a26a173551f1b4892d731c27bb838e9b4199
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2276
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
In vitro characterization and genome sequencing of two novel lytic phages against Salmonella Infantis isolated from poultry feces Battistelli,N., Tittarelli,F., Ruffini,F., Gavazzi,L., Scattolini,S., Acciari,V.A., Romualdi,T., Curini,V., Di Carlo,S., D'Alterio,N., Migliorati,G., Pomilio,F. and Aprea,G. 2024 39703709 GenBank