Protein

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Genbank accession
BEI45446.1 [GenBank]
Protein name
tail needle knob protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MADSNLNEPVIIQATRLDTSVLPRNIFSQSYLLYVIAQGTDVGNVANKANEAGQGAYDAQVRNDEQDVILADHEQRISAAEATLVNHEERISQAESTLQEHETRIAQNESDIASLDTRVQSLESQVSDHETRIDALEYATTRKKSEVVYSGVSVTIPTAPTNLVSLLKTLTPSSGTLAPFFDTVNNKMVVFNENKTLFFKLSIVGAWPSGTANRSMQLTFSGSVPDTLVSSRDSATTTDNILLATFFSVDKDGFLAANGSTLTIQSNGAEFTATTIKIIAEQ
Physico‐chemical
properties
protein length:282 AA
molecular weight: 30539,48490 Da
isoelectric point:4,60677
aromaticity:0,06028
hydropathy:-0,20426

Domains

Domains [InterPro]
G3DSA:1.20.5.340
STR
37–124
G3DSA:1.20.5.340 IPR038681
SSF57997
STR
40–140
SSF57997
SSF57997
STR
50–140
SSF57997
Coil
Unmapped
70–139
Coil
IPR032395
RBD
108–282
IPR032395
BEI45446.1
1 282
Architecture
STR
STR 37-282
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phiKp_30
[NCBI] 		2979984 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BEI45446.1 [NCBI]
Genbank nucleotide accession
LC768498 [NCBI]
CDS location
range 13779 -> 14627
strand -
CDS
ATGGCGGATTCGAATCTCAATGAGCCAGTAATCATCCAGGCTACGCGGCTCGATACATCAGTCCTTCCACGCAATATCTTCTCGCAGTCGTATCTGCTGTACGTTATCGCACAGGGCACTGATGTTGGTAACGTGGCTAACAAGGCCAACGAGGCCGGACAGGGCGCTTATGATGCACAGGTCAGGAACGATGAGCAGGATGTGATTCTCGCTGACCATGAGCAGCGAATTTCTGCTGCGGAAGCAACGCTTGTTAATCATGAGGAGCGAATCAGCCAGGCAGAATCAACTCTTCAGGAACATGAAACACGAATAGCGCAGAATGAAAGCGATATTGCGTCGCTTGATACCAGAGTTCAGTCGCTGGAATCGCAGGTTTCAGACCATGAAACGCGCATCGATGCTCTGGAGTATGCCACTACTCGAAAGAAGTCAGAGGTTGTTTACTCTGGCGTATCAGTAACCATCCCGACAGCGCCGACCAACCTTGTTAGCCTGCTGAAAACGCTCACGCCGTCATCCGGGACGTTGGCACCATTCTTCGACACTGTTAACAACAAGATGGTTGTGTTCAACGAGAACAAAACCTTGTTCTTCAAGCTGTCGATCGTCGGGGCGTGGCCCAGCGGAACCGCCAACAGGTCAATGCAGCTAACCTTTTCCGGCTCTGTTCCTGACACACTGGTAAGCAGTCGCGACTCGGCGACAACGACCGATAACATCCTGTTAGCTACGTTTTTCAGCGTGGATAAAGACGGCTTTCTTGCCGCAAATGGCAGTACGTTAACCATCCAGTCAAATGGTGCGGAGTTTACTGCCACAACCATCAAGATAATCGCGGAGCAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4f3dfd363ab764b0c7d91c1f2abde0067b628bc70a2a382e601ae0ed86315f79
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8199
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome of Klebsiella phage phiKp_30 Kondo,K., Nakano,S., Hisatsune,J., Sugawara,Y., Kataoka,M., Kayama,S., Sugai,M. and Kawano,M. 1959 — GenBank