Protein

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Genbank accession
WVP99828.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,67
Protein sequence
MALVIHYTRNEDGTFDVKRYRDNPMNFVVNHVPDGVPVRVFIDEIGEDNDVTEDFEALKEDATFHIVESAGGGAIKGVMKIFSVILKPLAKLLSPSVKGASSNLANSQADSPNNSLTDRNNKARPYERSYDICGTVQTIPNNLMSTYKVFNAAGKIVEYGYYDAGRGYLDIHPDGITDGDTRVSDITGTSVAVYAPYTSPNNTSTPQVMVGDPIEQGLYITVESNEVDGVVLKAPNGLGISFSYMSGYPSLSGNIGTIYDPTGGSDFSGVLVPNDTFSLVSAWTNTDVDLSGGGYQVVSVSEGTVTFIVPGGLIGRWQEIRPGSFFRGDGEASLQPDNTYEKTLTDWVSINRTEVERIVANIAAANGMYKDNGKSKTLASVTAEIQYQLLDENSAPYGPIYTAQGTVSGRTPDYNGVTIYADLPVVSRVRVRARRVTDLDFNFEGSVVDEITYVNLYGQTRDNTPHYGNRTTVHSMRKQTPRAAEVKQPQLRMIATEMVYKYLGNGVFEDTRTPNTQAVQSLIRLARDPDVGGLNLTVRNMDKLLAVQKEIEDYFGDKQAGEFCYTFDDYKTTMQDIVSTIADAIFCTPYRKGADILLDFERPRMGPEMVFTHRSKAGTSEKWTRTFNDAQVFDSLKFSYIDPKTNVKETITIPETGGVKTETYDSKGIRNYKQAFWAANRRHQKNILKKISVSFTATEEGIFALPNRAISVVKGSRMATYDGYITAVNGLTVELSQPVKFTAGDDHSLILKLRDGGVQSVNVVPGAHDRQVIMTSVPQEAIYTGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGFNYDKDFYKFDNVPPFGRAFSNGFDNGFN
Physico‐chemical
properties
protein length:852 AA
molecular weight: 93848,80100 Da
isoelectric point:5,23006
aromaticity:0,09742
hydropathy:-0,37207

Domains

Domains [InterPro]
DC_0118
STR
1–686
DC_0118 DC_0808
NF040662
Unmapped
352–832
NF040662
WVP99828.1
1 852
Architecture
STR
RBD
STR 1-686 | RBD 703-846 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVP99828.1
1 852
Domain Start End Length (AA) Confidence
N-terminal 1 230 230 0,9697
Central domain 231 429 200 0,6534
C-terminal 430 852 422 0,1584
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-230
Central
231-429
C-terminal
430-852

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SalS_JNS02
[NCBI] 		3117419 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhimurium str. ATCC 14028
[NCBI] 		1299114 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVP99828.1 [NCBI]
Genbank nucleotide accession
PP189839.1 [NCBI]
CDS location
range 37607 -> 40165
strand +
CDS
TTGGCGCTAGTAATTCACTACACACGAAACGAAGACGGCACATTTGACGTTAAACGTTATCGCGATAATCCGATGAACTTCGTCGTGAACCACGTTCCCGACGGGGTGCCGGTTCGCGTTTTCATTGACGAAATTGGAGAAGATAACGACGTAACAGAAGACTTCGAAGCACTGAAAGAAGACGCGACTTTTCATATTGTGGAATCCGCTGGTGGTGGCGCTATTAAAGGCGTCATGAAGATTTTTAGCGTTATTCTTAAACCGTTGGCGAAGCTCTTGTCGCCGTCCGTGAAAGGTGCGTCCTCGAACCTTGCGAACTCGCAGGCAGACTCCCCAAACAACAGTCTTACTGACCGCAACAACAAGGCGCGTCCGTACGAGCGCAGCTACGATATCTGCGGGACGGTACAAACAATACCCAATAACCTTATGTCTACTTATAAGGTGTTTAACGCCGCTGGTAAAATTGTAGAGTACGGCTACTACGACGCCGGGCGCGGCTACCTCGACATCCACCCGGACGGTATAACGGACGGGGATACCCGTGTATCAGATATAACAGGTACGTCGGTTGCCGTGTACGCGCCGTATACGTCACCAAATAATACATCCACACCACAGGTCATGGTTGGCGACCCGATAGAGCAAGGCCTGTACATCACCGTAGAATCTAACGAAGTAGACGGCGTGGTTCTGAAAGCACCTAACGGCCTGGGTATTTCTTTCTCTTACATGTCAGGGTATCCGTCTTTGTCAGGAAACATTGGCACTATATACGACCCAACAGGCGGCTCGGATTTTTCTGGAGTACTGGTGCCTAATGACACGTTTTCGCTGGTGTCCGCGTGGACAAATACAGACGTTGACCTGTCCGGCGGCGGGTATCAGGTAGTCAGCGTGTCCGAAGGGACTGTTACCTTTATAGTACCTGGCGGTCTCATTGGTAGGTGGCAAGAAATAAGACCGGGTTCCTTTTTCCGTGGTGACGGAGAGGCCTCGCTGCAACCAGACAACACGTATGAGAAAACTTTAACCGATTGGGTTTCAATAAACCGTACCGAAGTAGAGCGCATTGTAGCCAATATCGCCGCCGCGAATGGTATGTATAAAGACAACGGCAAATCGAAAACACTGGCGTCGGTCACCGCTGAGATACAGTACCAGTTACTTGATGAAAATAGTGCCCCTTACGGGCCGATATACACTGCGCAAGGAACCGTGTCCGGACGCACCCCGGACTACAACGGAGTCACTATCTATGCCGATCTGCCGGTTGTATCTCGTGTAAGGGTTAGGGCCCGTAGGGTTACGGACCTTGACTTCAATTTTGAAGGGTCTGTAGTCGATGAAATAACGTATGTGAACCTGTATGGACAGACGCGAGATAACACCCCGCACTACGGCAACAGAACAACCGTACACTCGATGCGCAAGCAGACACCGCGCGCTGCGGAGGTTAAGCAACCGCAGTTGCGTATGATTGCCACCGAAATGGTATACAAATACCTTGGTAACGGTGTTTTCGAAGACACGAGGACCCCTAATACTCAGGCTGTGCAATCTCTTATCCGCCTGGCACGTGACCCAGATGTGGGTGGCTTAAACCTGACAGTGCGAAACATGGACAAGTTACTTGCCGTTCAGAAAGAGATTGAAGATTATTTCGGCGACAAGCAAGCGGGGGAATTTTGCTACACGTTCGATGACTATAAAACCACTATGCAGGACATAGTTAGTACTATAGCTGACGCTATATTCTGCACCCCATATCGGAAAGGGGCGGATATCCTTCTTGATTTTGAACGCCCTCGCATGGGCCCGGAGATGGTGTTCACCCACCGAAGCAAGGCCGGTACTTCTGAAAAATGGACAAGGACATTTAACGATGCTCAGGTGTTCGATAGTCTTAAATTCTCGTACATAGACCCAAAAACAAACGTTAAAGAAACAATAACAATACCTGAAACTGGTGGGGTTAAAACGGAGACTTATGACTCTAAAGGTATTCGCAACTATAAGCAGGCTTTCTGGGCCGCTAATCGCCGTCACCAGAAGAACATTTTAAAGAAAATTTCAGTGTCGTTTACCGCCACGGAAGAGGGTATCTTTGCTTTGCCAAATCGTGCCATTAGTGTCGTTAAGGGCTCACGTATGGCTACCTACGATGGCTACATAACCGCAGTAAACGGGCTCACCGTAGAACTATCGCAACCGGTTAAGTTCACAGCGGGAGATGACCATTCTTTGATTCTCAAGTTACGTGATGGTGGAGTGCAAAGTGTTAATGTAGTCCCTGGAGCGCACGACAGGCAGGTGATTATGACATCAGTGCCGCAAGAAGCCATTTACACAGGTAATAGTGCTTTGAAAACTGAATTTTCATTCGGCAACGAAGCAAGGCATAATGCTCAGATGATTCTTGTTTCTACGGTAGACCCCGGCGATGACAGAACAGTCAAAATAACCGGGTTTAACTATGACAAGGATTTCTATAAGTTCGACAACGTGCCTCCTTTCGGTCGTGCGTTCTCCAACGGATTCGATAACGGTTTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6d4f545397798b84ba3b63434c7c6253f0f267c77528b203ecdef47427fef695
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8270
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50