Protein

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Genbank accession
ARM67884.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MELYKGSKINAIINEKGVNLGYINLNLYTMDNSTSVIDIHLKMRNVLSEKQEYFPINLNQTEFEPVLHLFAQDGSIFTNEKLEIVKAEEGYVRYYIPDYVTRHVGQINAKLFLEDTSGSDDSSHVADFYFIIKESGVTKAVGKEIHVELLNDIVEKIMKDNLEMFKGDKGDKGESGKDGVDGKNGKDGVDGKDGKKGEDGRDGFNGRDGKDFTYDDFTPEQLESLKGPKGDKGDPFRYENFTADQLESLKGPQGERGIQGPVGSTGPIGPKGVDGVIKFENLTEEQKSDLRSGLNYNVVNNVNDVMSRINIMEGSNFKLPVFTPNDFGLVDYPIKNKIFTNGRGQFYVNYDVGQKKLKGGKTYYVNCVSGSDSNEGLTKEKAFKSINYAISNAQDNDTVILCEGNHFKNGGLLLPKPTSKSINIVGESENVNVIWGDDPIWQKTANMKNVYEFDRTGVSNVIDLKSDISFKSVDSIQNVDNTINSWYTDDSKVYTNCGSTPDKNVIPILKGSSVQVNNIVSDLYIENVNFIGGNNCLQVDLSKNNNLYLKNVSFSFSNYLYNGLAVTGGESVILQNCSANNNGFDGFNYHIGKDQSLPLVIEINCRAYENGNDKGTAGFKSNNGTTTHDGITSIRINGVYARNDGGNVADVNENTKSWNIGCAAFESYQGKDFQTASGSNMWLDNCIAYGSENSINSADPYSVIYTRSGDYRNKLITGKEINY
Physico‐chemical
properties
protein length:723 AA
molecular weight: 79854,59000 Da
isoelectric point:4,96809
aromaticity:0,09682
hydropathy:-0,57607

Domains

Domains [InterPro]
DC_0885
STR
1–405
DC_0885 DC_1219
IPR018913
ATT
10–158
IPR018913 PTHR24637 IPR011050
G3DSA:2.60.40.3350
ATT
15–138
G3DSA:2.60.40.3350 IPR008160 G3DSA:1.20.5.320 IPR012334
ARM67884.1
1 723
Architecture
ATT
STR
ATT 1-158 | STR 159-722 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ARM67884.1
1 723
Domain Start End Length (AA) Confidence
N-terminal 1 396 396 0,9650
Central domain 397 712 317 0,9891
C-terminal 713 723 10 0,1464
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-396
Central
397-712
C-terminal
713-723

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage IME1323_01
[NCBI] 		1965487 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus caprae
[NCBI] 		29380 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARM67884.1 [NCBI]
Genbank nucleotide accession
KY653117.1 [NCBI]
CDS location
range 39208 -> 41379
strand +
CDS
ATGGAGTTATACAAAGGGAGTAAGATTAACGCTATTATAAACGAAAAAGGTGTTAACCTTGGATATATTAACTTAAATCTTTACACAATGGACAATTCAACGTCGGTAATTGATATACATTTAAAAATGAGAAATGTTTTAAGCGAGAAACAAGAGTATTTCCCTATTAATCTTAATCAAACTGAATTTGAACCTGTATTACATCTATTTGCACAAGACGGTTCAATATTTACAAATGAAAAATTAGAAATTGTCAAAGCAGAAGAAGGATATGTAAGATATTACATTCCGGACTATGTAACGCGTCACGTAGGACAAATAAATGCGAAACTATTTCTTGAAGATACTAGTGGCTCTGATGATAGTTCACATGTAGCAGATTTCTATTTCATTATCAAAGAAAGCGGAGTTACTAAAGCGGTTGGTAAAGAAATACATGTTGAATTACTCAATGATATTGTCGAAAAGATTATGAAAGACAACCTCGAAATGTTCAAAGGCGACAAAGGAGATAAAGGCGAGTCAGGTAAAGATGGCGTTGATGGTAAAAATGGAAAAGATGGTGTTGATGGTAAAGATGGTAAAAAGGGTGAAGATGGTAGAGACGGCTTTAATGGTCGTGATGGCAAAGATTTCACTTATGATGATTTTACACCAGAACAATTAGAGTCTTTAAAAGGTCCTAAAGGAGACAAAGGGGATCCTTTCCGCTACGAAAATTTTACAGCAGACCAATTAGAATCTTTAAAAGGTCCTCAAGGTGAACGTGGAATACAAGGACCTGTAGGCTCTACTGGCCCTATTGGCCCAAAGGGTGTAGATGGTGTTATAAAATTTGAAAACTTAACCGAAGAACAAAAATCAGATTTACGTTCAGGTTTAAATTACAATGTAGTCAACAACGTTAACGATGTAATGTCTAGGATTAACATTATGGAAGGTAGTAATTTTAAACTTCCAGTTTTTACTCCTAATGATTTTGGCTTGGTCGATTACCCTATCAAAAATAAAATTTTCACTAACGGTAGAGGGCAGTTTTATGTAAATTATGATGTAGGTCAAAAAAAGTTAAAAGGGGGAAAAACTTATTACGTAAACTGTGTCTCTGGGTCTGATTCTAACGAGGGATTAACCAAAGAAAAGGCTTTTAAATCTATAAATTACGCAATCAGTAACGCTCAAGATAACGATACCGTCATTTTATGCGAAGGCAATCATTTTAAAAATGGTGGTTTGTTATTACCTAAACCTACAAGTAAGAGTATTAATATTGTGGGAGAAAGTGAAAATGTTAACGTCATTTGGGGGGATGATCCTATATGGCAAAAGACTGCAAATATGAAGAACGTTTACGAATTCGATAGAACTGGAGTTTCAAATGTAATAGATTTAAAAAGCGATATTTCGTTTAAATCTGTCGATTCAATACAAAATGTTGATAATACCATTAATTCATGGTATACAGATGATTCAAAAGTATATACTAACTGTGGGTCAACGCCAGATAAGAATGTTATTCCTATACTAAAGGGTTCAAGCGTTCAAGTAAACAATATAGTATCTGACTTATATATTGAGAATGTTAACTTTATCGGTGGCAACAATTGCCTTCAAGTTGACTTGTCAAAAAATAACAATCTGTATTTAAAAAACGTTTCGTTTTCTTTTTCAAATTATTTATATAATGGATTAGCAGTTACAGGTGGAGAGAGCGTCATATTGCAAAATTGTAGCGCTAACAACAATGGTTTCGATGGATTTAACTATCACATCGGTAAAGATCAATCATTGCCTTTAGTTATAGAGATAAATTGTAGAGCTTATGAAAACGGAAACGATAAAGGAACTGCTGGTTTCAAATCAAATAACGGAACCACAACACACGATGGTATAACTTCAATTCGCATAAATGGTGTCTATGCACGTAATGACGGTGGAAACGTAGCGGATGTTAATGAAAATACAAAATCATGGAATATTGGTTGTGCGGCTTTTGAAAGTTATCAAGGTAAGGATTTTCAAACAGCATCTGGAAGTAATATGTGGTTAGATAATTGTATAGCTTATGGCAGCGAAAATAGTATAAACTCTGCAGATCCATATAGCGTTATCTATACTAGATCAGGCGACTATCGAAACAAACTCATAACCGGAAAAGAAATTAATTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5c1502da27299ceb6b75125d7a5a8975f23932446a4f3a326b9982d614c360e5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7338
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Analysis of active prophages from bacterial high-throughput sequencing data Sun,Q., Zhang,X., Xing,S. and Tong,Y.-G. 2018-12-28 — GenBank