Protein

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Genbank accession
QUE30173.1 [GenBank]
Protein name
constituent protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAYQVYKVEKPKGVNFSLEPSQLDSTMWDEANEVSFKHGKTKKVSGYEQGLGQTGVLNDGSVYPEIILPLRDDTDENYWWAYASTKQDGTGEIYRIVTKDLHQDVTPTAGIPSEPEFRWFGDTINGVPYFMKGKPYVWDGVSKFEELETFPGHVKAQVMRTYGNHMVAMDFKVDNFTPPADPQTPEEEYQAKFSPWNEGRHRSAVWWSSAINTKDLSVSWADADPTTESGWNFLGGNGGPILGGKSLRESFIIYRERAVWQMSYIGGILVFAFKELFNDVGVLGPDCVAEIDGYHFVVGQSDIYMHNGVYKESVADGIVRNRIFDSIDPDHIDKVFVAVRYQEKEAWVCIPEASTNVNGRCNVAYVYNWEERHWSKRDMPDSLTSTYTILSITEGDITWTAPSEDASWEEATDTWISSYFKYNSSQWGLAFAGVTSDGKGAVYTTIDEPTWDGANFKASVEKKWIDMEDYTTTKTLNKIWPLVRGGEVDVWVAGSETTTQSPAWRYVGRFDPNKRANLGCTATGKFIHVKFEIPEKSRAELRGYWLEYKATGAR
Physico‐chemical
properties
protein length:554 AA
molecular weight: 62748,15340 Da
isoelectric point:4,95991
aromaticity:0,13538
hydropathy:-0,51895

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QUE30173.1
1 554
Domain Start End Length (AA) Confidence
N-terminal 1 61 61 0,9813
Central domain 62 260 200 0,2912
C-terminal 261 554 293 0,5444
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-61
Central
62-260
C-terminal
261-554

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_ValP_IME234
[NCBI] 		1852639 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QUE30173.1 [NCBI]
Genbank nucleotide accession
MW748992 [NCBI]
CDS location
range 35410 -> 37074
strand -
CDS
ATGGCATACCAAGTTTATAAAGTTGAGAAACCAAAAGGTGTCAACTTTTCACTAGAGCCATCACAATTAGATTCTACTATGTGGGACGAGGCTAATGAAGTATCGTTTAAGCATGGTAAGACTAAGAAGGTATCTGGTTATGAACAAGGCTTAGGTCAGACTGGTGTTCTTAATGATGGTTCGGTATATCCTGAAATTATCCTCCCTTTGCGAGATGATACTGACGAGAACTACTGGTGGGCTTATGCCTCAACCAAACAAGATGGTACTGGTGAAATCTACCGTATCGTCACTAAAGACTTACACCAAGATGTTACACCAACAGCAGGTATCCCTAGCGAGCCTGAGTTCCGTTGGTTTGGTGATACAATCAATGGTGTTCCATACTTCATGAAAGGTAAGCCTTACGTGTGGGATGGAGTAAGTAAATTTGAAGAACTGGAAACATTCCCCGGACATGTTAAGGCTCAGGTTATGCGAACCTACGGCAACCACATGGTGGCAATGGACTTTAAGGTAGATAACTTCACACCTCCGGCTGACCCGCAGACGCCAGAAGAAGAATACCAAGCGAAGTTCAGTCCTTGGAACGAGGGACGTCACCGCTCTGCTGTATGGTGGTCTAGTGCTATCAACACAAAAGACTTAAGTGTTTCTTGGGCAGATGCAGACCCAACTACAGAGTCCGGTTGGAACTTTCTAGGCGGTAATGGTGGACCGATTCTTGGAGGTAAATCACTTCGAGAGTCGTTCATCATCTACCGTGAACGAGCAGTATGGCAGATGTCATACATTGGCGGTATCTTAGTATTCGCCTTTAAGGAATTGTTTAACGACGTAGGTGTACTTGGTCCAGATTGTGTGGCTGAGATTGATGGCTACCACTTTGTGGTTGGTCAATCAGACATCTATATGCATAATGGTGTATATAAAGAATCTGTAGCAGACGGTATTGTACGTAACAGAATCTTTGACTCTATTGACCCAGACCATATTGACAAGGTATTCGTAGCTGTACGTTACCAAGAGAAAGAGGCATGGGTATGTATTCCAGAAGCATCAACAAACGTTAATGGTCGTTGTAACGTAGCATACGTATATAACTGGGAAGAGCGTCACTGGTCTAAACGAGATATGCCAGATTCATTGACTTCTACTTACACTATCCTATCTATTACAGAGGGTGATATTACATGGACAGCTCCATCAGAAGATGCCTCATGGGAAGAAGCCACTGATACATGGATTAGTTCATACTTTAAGTATAACAGCTCACAGTGGGGCTTAGCGTTCGCTGGTGTTACCTCAGATGGTAAGGGTGCTGTATATACAACTATTGATGAACCAACTTGGGATGGTGCTAACTTTAAAGCCAGTGTAGAGAAGAAATGGATTGACATGGAAGACTATACAACCACTAAGACACTCAATAAGATTTGGCCTCTCGTTCGGGGTGGTGAAGTTGATGTGTGGGTAGCTGGTAGTGAGACAACTACACAGTCTCCAGCTTGGAGATATGTTGGTAGGTTTGACCCTAACAAGCGAGCTAACCTAGGTTGTACAGCAACAGGTAAGTTCATTCATGTTAAGTTTGAAATCCCAGAGAAGAGTCGTGCAGAATTGCGTGGCTATTGGCTAGAATATAAAGCAACAGGAGCTAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
edb715417f9cb51efebdc86dec4f09d75852f287980b8337d4017ca1e2488842
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8350
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50