Protein

View in Explore
Genbank accession
QHJ75702.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,72
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MALDPNINRIKFLRSSTAGSKPTTAQIAPGEIAINLADKTLYSTDGTNIIDIGFGLGGSVNGPVNATNRISTDDFMYSKYGFSVNSETADGRGISLYGNGYVSSNGLPSYGIAMAATSKYGSFGAVTGSHATYFTINSGTNRGWIFNYNGNTNVASISGAGIATFSRVDAPLNGNATSATKLLNGKNINGVLFDGTSDINTPAVTNVLSFDHRAIKPNGITNRALGVYFTTQAGLNGAAGTDYGDFISLSTYQDSSGGNANGLFFNKFTHQILHYQGTFGSNTWGTPKVIAYTDSSIAGNAGSATKLFTPRKINNAPFDGTQDISVNATYSEYVPDNADLNNYKTPGLYYCPTDSGAATQLNVPAKIAYSLFIERHAGIKQTLTQYASNRTFIRRFYNGSWDNWRELAFLNPDDQTFTENIILSKDAGNVAATIRTKDASYSELMLSNANKATSLSIIPDGTLFLWDVSRQTPYMSFSPDGVQSILNSKLLINTPTSLNVTGGETFAVTGGESSPIRFKINRAGAITTNVPETGAAIVHATSYNWYNTEWQIGNIRGGSTNSLGFGITKFNDTLVWRHDGNTMTNYGNISNTGSISTQGDISSNGNLSTAGSISGDSLITRTGRIGAPTSTYHYLDIGRDSTDITTVGQYGGAFRVVDTSNGATSFYVDPVDAKFSGKITTKPVTFYWNVTDLGNSTAAITVPDAIAPQGKTGYAPFIHGSVQTDGFGYRTNVSIGAFRGSNTWSASGAYIAIGGNDNYTTEDFRFMSGGYIGTSSGTLNILGTLVAPTLNSTTFNVDAINSTTVNVASNIYFSTAFGINGIYNGNGDGATLATANLDIRAHYGLGILDNLGNRNIVFNSRTGEIGTRGVQIYLGNTTSAETRLLTNDSHLQFLTSGGNAKGIATGGVLTSDSYADFNKVPTNGIYSKGDIICGSGYMVAHRYVGITGAPNTGVFDGNANTATRLQTARTIGGVSFDGTASINLPGVNIQGNQNTTGNAGSATVLQTARNFSISGAVTSNTVPFNGNADVNLQINTLDGSKVSGTVAYANIAQRARTVDIAGNQGTKLVAQWTGAVFGTFARNLVYNTDTTLMVEIGGQDCTNDMTNNFRVGSTIHMIKGLSSNSWQGDVINATVLSITSNRSTNSLIMTLDVPGHGLSSGQAASYYFLGATYTARGCYFLGTVSSEAKGSITGGDYSYLIRTTTAVTNPSITGSVSGDVSLYHNLVGYGFLNGSYSCSMSTTMVNGNTCNFVVTDNNSNAKARTGMVTIQIWDAM
Physico‐chemical
properties
protein length:1276 AA
molecular weight: 134403,76940 Da
isoelectric point:6,44397
aromaticity:0,09718
hydropathy:-0,16708

Domains

Domains [InterPro]
DC_0113
STR
1–80
DC_0113 DC_0113
cd19958
STR
335–408
cd19958 IPR005601 DC_0113
QHJ75702.1
1 1276
Architecture
STR
STR
STR 1-80 | STR 83-1276
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QHJ75702.1
1 1276
Domain Start End Length (AA) Confidence
N-terminal 1 1038 1038 0,0788
Central domain 1039 1237 200 0,3931
C-terminal 1238 1276 38 0,9724
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-1038
Central
1039-1237
C-terminal
1238-1276

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaM_PhT2
[NCBI] 		2690230 Uroviricota > Caudoviricetes > Pantevenvirales > Twarogvirinae > Hadassahvirus
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHJ75702.1 [NCBI]
Genbank nucleotide accession
MN864865.1 [NCBI]
CDS location
range 48359 -> 52189
strand -
CDS
ATGGCTTTAGATCCAAATATTAATCGAATAAAATTTTTACGGTCTTCTACGGCTGGAAGCAAGCCAACGACTGCCCAAATTGCTCCAGGTGAAATTGCTATTAACTTAGCAGATAAAACACTATATAGCACTGATGGTACAAACATCATAGATATTGGCTTTGGGCTAGGTGGAAGTGTCAATGGCCCAGTAAATGCTACCAATCGGATCAGCACTGATGATTTCATGTATTCTAAATATGGTTTTTCGGTAAACTCAGAAACAGCCGATGGGCGAGGTATTTCTTTATATGGAAATGGATATGTTTCATCAAATGGCCTGCCATCTTATGGCATAGCAATGGCCGCGACAAGCAAGTATGGTAGCTTTGGTGCAGTAACAGGGTCTCATGCAACATATTTTACTATTAACTCAGGCACTAATCGCGGCTGGATTTTCAATTATAACGGAAATACTAACGTGGCTTCTATTTCTGGTGCAGGTATTGCTACTTTTTCGCGAGTAGATGCCCCTTTAAATGGCAATGCTACATCAGCTACAAAGTTACTAAATGGTAAAAACATCAACGGTGTGTTATTTGATGGTACATCCGACATTAATACTCCTGCGGTAACAAATGTATTATCCTTTGATCATCGAGCAATAAAACCTAACGGCATTACAAACCGTGCCCTAGGAGTGTATTTTACTACCCAGGCAGGATTAAACGGTGCCGCAGGAACTGATTACGGTGATTTTATATCTTTGAGCACCTATCAAGACAGTTCGGGTGGAAATGCCAATGGATTGTTCTTTAATAAATTTACTCATCAAATTTTACATTATCAAGGGACTTTTGGAAGTAATACCTGGGGAACACCTAAAGTAATCGCTTATACTGATAGCTCTATTGCCGGTAATGCTGGCTCAGCTACAAAATTGTTTACACCTAGAAAAATAAACAATGCACCATTTGACGGAACACAAGATATTAGTGTAAACGCCACGTATTCTGAATACGTTCCGGATAATGCAGATTTGAATAATTATAAAACTCCTGGGTTGTATTATTGTCCTACTGACAGTGGAGCCGCGACACAGCTGAATGTTCCAGCCAAAATCGCATACTCGCTGTTTATTGAGCGACATGCAGGTATCAAGCAGACTCTTACTCAATATGCATCTAATAGAACTTTCATCAGACGTTTTTATAATGGGTCTTGGGATAATTGGCGTGAATTAGCATTTTTAAACCCGGACGACCAGACATTTACTGAAAATATTATTCTTTCAAAGGATGCCGGAAATGTAGCAGCGACTATTAGAACTAAAGATGCTTCTTATTCTGAATTGATGCTAAGCAATGCAAATAAAGCAACATCTTTAAGCATTATTCCAGACGGTACTCTCTTCTTGTGGGACGTAAGTAGACAGACTCCATATATGTCTTTTTCTCCTGATGGTGTACAATCGATATTAAATTCTAAGTTGTTGATTAATACTCCAACATCACTAAATGTTACAGGCGGAGAAACATTTGCTGTTACGGGTGGAGAAAGTTCCCCAATCAGATTTAAAATTAACCGCGCTGGAGCTATTACCACAAATGTTCCTGAGACCGGCGCCGCTATTGTCCATGCTACTTCATACAACTGGTATAACACTGAATGGCAAATTGGTAACATTCGTGGCGGTTCTACTAACTCTCTTGGGTTTGGTATTACTAAATTCAACGATACATTAGTATGGCGCCATGATGGCAATACTATGACCAACTACGGTAACATTAGTAATACGGGTTCGATCAGTACGCAAGGAGATATTTCATCTAATGGTAACTTGAGTACTGCAGGTTCAATCAGCGGAGATAGTTTAATCACTAGAACTGGACGTATCGGTGCGCCAACATCTACGTATCACTATCTCGATATCGGTAGAGACAGTACAGATATTACTACGGTCGGTCAATATGGAGGTGCATTTAGAGTTGTTGATACATCTAATGGAGCTACTTCGTTTTATGTAGACCCGGTTGATGCTAAATTTTCAGGTAAGATTACTACAAAACCTGTGACTTTCTATTGGAATGTAACAGATTTAGGTAATTCTACTGCAGCTATCACGGTTCCAGATGCTATTGCTCCTCAAGGTAAAACTGGATATGCTCCTTTTATTCACGGTTCTGTCCAAACCGATGGTTTTGGTTATAGAACTAATGTATCTATTGGTGCTTTTAGAGGTTCTAATACTTGGTCCGCTTCAGGCGCTTATATCGCTATCGGAGGAAACGATAACTATACGACAGAAGATTTTAGATTTATGTCTGGCGGTTATATTGGAACAAGTAGCGGTACATTGAATATTTTAGGTACTTTGGTTGCACCTACATTAAATTCAACTACATTTAATGTTGACGCTATTAATAGTACTACAGTTAATGTAGCATCGAATATTTACTTTTCTACAGCTTTTGGCATAAACGGAATCTACAATGGTAATGGCGATGGAGCTACTTTAGCTACTGCTAACTTAGATATCAGAGCGCATTATGGTTTGGGTATTCTTGATAACTTGGGTAATCGTAATATCGTCTTTAATTCAAGAACTGGTGAAATTGGAACAAGAGGCGTACAGATTTACTTAGGTAACACTACAAGCGCAGAGACTAGATTATTGACAAATGATAGTCATTTACAATTTCTTACTAGCGGCGGTAATGCCAAAGGTATTGCAACTGGCGGTGTGTTAACTTCGGATTCGTACGCCGATTTTAATAAGGTTCCGACAAATGGTATCTATTCGAAAGGTGATATTATATGCGGTTCAGGATATATGGTCGCACATCGATATGTTGGTATAACTGGTGCGCCAAATACTGGTGTATTTGATGGTAATGCAAATACAGCTACTCGCCTACAAACAGCTAGAACTATCGGTGGCGTATCTTTTGACGGTACTGCTAGTATTAACTTACCTGGTGTTAACATACAAGGTAACCAAAATACAACTGGTAATGCTGGATCAGCTACAGTATTGCAAACAGCTAGAAACTTCTCTATTTCTGGCGCAGTTACTTCTAATACAGTTCCATTTAATGGCAATGCAGACGTAAATCTGCAGATTAATACATTAGATGGTAGTAAAGTAAGCGGTACAGTCGCTTATGCAAACATTGCTCAACGCGCTCGAACCGTTGATATCGCTGGAAATCAAGGAACAAAACTTGTAGCACAATGGACAGGAGCGGTATTTGGCACGTTTGCACGAAATTTGGTATATAATACTGACACTACGTTAATGGTAGAAATAGGAGGCCAAGATTGTACAAATGACATGACAAATAATTTTAGAGTCGGTTCTACTATACACATGATAAAAGGTTTGTCTTCTAACTCTTGGCAAGGAGATGTAATCAACGCTACTGTTCTATCTATTACTTCTAATAGAAGCACAAATTCGTTGATTATGACTTTAGATGTTCCTGGACATGGTTTAAGTTCTGGTCAAGCAGCATCTTACTATTTCTTAGGAGCTACTTATACTGCTAGAGGTTGCTATTTCTTAGGTACTGTATCGTCTGAAGCTAAAGGTTCTATAACCGGTGGCGATTATTCATACTTGATTAGAACTACTACTGCAGTAACAAATCCTAGCATCACCGGAAGTGTATCCGGCGATGTATCGCTTTATCACAATTTGGTTGGTTATGGTTTTTTGAATGGCTCATATTCTTGTAGTATGTCGACAACTATGGTAAATGGAAATACATGCAACTTTGTTGTTACTGATAATAATAGCAATGCTAAAGCTAGAACAGGTATGGTAACAATCCAAATATGGGATGCTATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7d7e26a5ee3883d434f4745e107a8bce48c073509fe82265b4a811edaecc5d66
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4675
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Investigating Bacteriophages Targeting the Opportunistic Pathogen Acinetobacter baumannii Styles,K.M., Thummeepak,R., Leungtongkam,U., Smith,S.E., Christie,G.S., Millard,A., Moat,J., Dowson,C.G., Wellington,E.M.H., Sitthisak,S. and Sagona,A.P. 2020 32331271 GenBank