Protein

View in Explore
Genbank accession
WBF78473.1 [GenBank]
Protein name
putative long tail fiber proximal subunit protein
RBP type
TF
Evidence RBPdetect
Probability 0,63
Protein sequence
MSEVKTSFRASYGLDAAGEKVINVAKADKTVMTDGVNVEYLIQENTTQQYDPERAYEKGFIIEFNDRLWIAEQDIPKPAGSFNEGYWRPVRTDPKWKPIDSGKYQLHVGDYITVDTRAGLAVELTLPTNPIPQEGDTIVVKDVGGQPGYTSVLVFAPVQSIIDKGVSIPQKRMTIPFSEWTFVYTKSQWSLYDGVEAPVARTVTTASPTQIQSGDTILRNYDKVAPIVLTFPKFANNGDIIHFVGMNENTVPYYHLELNAFDSNTSIGSPGKSSQIFYRSLSGYFIFNSLTSTWYLYDSDMTDRLRTVSTDTEIFPNETVAVVGKDNTTTQTIKLTLPQNVQPGDQVTISLNYIRKGQTVNIVPKGTDMILTNQNLTQFPKRSSYPPAANWVNTNLLSYNGSNDYPPVLTFAYIDMGPIKQWLMVSCLPVLERVDPTTDDTRTRLGVIALANQSQANLDKENISVTANPLAREVAITPETLANRTALDDRRGIARIAKQEEVNLTTDDAALAYDTIVTPKTLNGKKATETMVGLAEIATQAETNSNTDDSRIITSKKLDGRRATPALAGVAKLVATGGTAPVKEGTNTRDTAGTGIYNHADFENIVTPKTLREYYSTEMALGTVYLANSAEVISGAATLAKYPLAVTPETLHTKTATDGRIGFSQVAKQAEVDAGTDYFKFVTPKTLAGRIAREDLAGIAKLATQGEFDAGTAGLISGPDKIKTFFSRAERTIVNNAEGLTQSGSIWTGLKLNILAPSETQRGTARYATQDETDKGIDATTIVTPAKLHAKKATTVAEGIVRMANTAETAAGTAYNLAVSPGNLKYVVQSELTWEATPERRGFIKLSTGSSTWQGNTVDGNANIDIETQFNKNGMAVSPYEFNRVLRNYLPIGAKAVDSDKLDGLDSSQFIRRDIAQVVNGALTLTQPTTATYITASNDVSVQALLSADQINIRKSGTPDDTSVTKNAGINLYGAPQSATGRPTYGIHFSSTGGTDPNGIHGYGAGTWGTYFAQSVSSAAEQRAWYFQQIFNGAVKNVGSITAQGDVWFDGVINSDKTFRLKNSVIAEKDSGDNLIFGTTDQQMYLRSKAADIKVQEVVGGTSYQVITSKNFVDEGNKTYVRKTGDSMTGRLNISQPITATINQSAATPNAVPNASNFGTWTIDITDPAIYNTMRPYVVGVNAINKETGEVLPWFDKYEEFNGPGTLSQFGSSASNGSGTYQIWAPRPPADKANLPGHIAGTMWTRQWNPITNKWDGWGRVFTNNHPPLPTDIGAMSNNGSVFDSMRIRDWIQVGNLRIYADPSTKTVRFDWIE
Physico‐chemical
properties
protein length:1314 AA
molecular weight: 143079,33340 Da
isoelectric point:5,54580
aromaticity:0,08676
hydropathy:-0,35259

Domains

Domains [InterPro]
DC_1986
ATT
7–128
DC_1986 DC_1209
IPR048391
ATT
1153–1262
IPR048391
WBF78473.1
1 1314
Architecture
ATT
STR
ATT
STR
ATT 7-128 | STR 345-1152 | ATT 1153-1262 | STR 1263-1295 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaM_DLP1
[NCBI] 		2999079 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii AB5075
[NCBI] 		1116234 Pseudomonadota > Gammaproteobacteria > Moraxellales > Moraxellaceae > Acinetobacter > Acinetobacter baumannii

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBF78473.1 [NCBI]
Genbank nucleotide accession
OP946501 [NCBI]
CDS location
range 148587 -> 152531
strand +
CDS
ATGTCTGAAGTAAAAACAAGTTTCCGTGCGTCATACGGTCTAGACGCGGCTGGTGAGAAAGTAATTAATGTTGCAAAGGCTGACAAAACTGTCATGACCGATGGTGTCAACGTCGAATATCTCATTCAGGAAAATACGACCCAACAATATGACCCAGAGCGTGCCTATGAAAAAGGATTCATTATAGAATTTAATGATCGTCTCTGGATTGCAGAACAAGACATCCCTAAACCTGCAGGTAGCTTCAATGAAGGGTACTGGCGCCCAGTACGTACAGACCCAAAGTGGAAGCCTATCGATTCTGGTAAATATCAGTTACATGTTGGTGATTATATCACTGTAGATACGCGTGCAGGTTTAGCTGTAGAACTAACATTACCTACTAATCCTATACCGCAGGAAGGCGATACAATTGTTGTAAAGGATGTCGGCGGGCAACCAGGTTACACATCGGTGTTAGTCTTTGCACCTGTGCAGTCAATTATTGACAAAGGCGTAAGTATTCCACAAAAACGAATGACTATTCCATTTTCTGAATGGACATTTGTATACACAAAGAGCCAATGGTCATTATATGATGGCGTTGAAGCCCCAGTAGCAAGAACTGTTACTACAGCTAGTCCTACTCAAATCCAATCAGGTGATACGATTCTTAGAAACTATGATAAAGTAGCTCCTATTGTATTGACTTTTCCTAAATTTGCCAACAATGGCGACATAATTCATTTTGTAGGCATGAATGAAAATACAGTGCCTTATTATCACTTAGAGCTTAATGCATTTGATAGCAATACAAGTATTGGTTCTCCGGGTAAGTCATCGCAAATTTTCTATCGTTCACTAAGTGGATATTTCATTTTTAATAGCTTGACTTCAACTTGGTATTTGTACGATTCAGATATGACAGATCGTCTTAGAACTGTTAGTACTGATACTGAAATTTTCCCGAATGAAACTGTAGCAGTAGTAGGCAAAGATAATACTACTACACAGACTATTAAATTGACTTTGCCACAAAACGTGCAACCGGGCGATCAGGTAACAATTTCATTAAATTACATTAGAAAGGGACAAACTGTTAACATCGTGCCTAAAGGCACCGATATGATTTTAACAAATCAAAATCTAACTCAGTTCCCTAAACGCTCAAGTTATCCACCTGCTGCCAATTGGGTTAACACTAATTTATTGTCATATAACGGTTCAAATGACTACCCGCCAGTATTAACATTTGCATACATTGATATGGGGCCTATCAAACAATGGCTGATGGTAAGTTGTTTGCCTGTATTAGAGCGTGTTGATCCGACAACAGATGATACTCGTACTCGTTTAGGTGTTATTGCTTTAGCAAATCAATCTCAAGCAAACTTAGACAAAGAAAATATTTCGGTTACTGCAAATCCATTAGCACGAGAAGTCGCTATCACGCCGGAAACTCTTGCCAATAGGACCGCTTTGGACGACCGTCGTGGAATCGCAAGAATCGCCAAACAAGAAGAAGTAAACTTAACTACAGATGATGCTGCATTAGCATATGATACTATCGTTACGCCTAAGACTCTTAATGGCAAAAAGGCTACAGAAACGATGGTAGGTTTAGCAGAAATTGCTACTCAAGCCGAAACCAATAGCAACACTGACGATTCTCGTATCATCACTTCTAAGAAATTAGATGGACGACGCGCAACACCTGCTTTAGCCGGAGTCGCTAAACTTGTTGCTACAGGTGGCACTGCGCCTGTTAAAGAAGGTACAAATACCCGTGATACTGCTGGAACTGGCATTTATAATCATGCAGACTTTGAGAACATTGTTACACCTAAAACATTGAGAGAATATTATTCTACAGAAATGGCATTAGGTACAGTGTATCTTGCAAATTCTGCTGAAGTTATTTCTGGTGCAGCTACATTAGCTAAATACCCATTAGCAGTAACTCCTGAAACTTTGCACACTAAGACCGCTACCGATGGGCGTATAGGCTTTTCACAAGTGGCTAAACAAGCCGAAGTTGATGCTGGAACAGATTATTTTAAATTTGTTACGCCAAAAACTTTAGCAGGAAGAATTGCACGAGAAGACTTAGCAGGTATCGCAAAATTAGCAACCCAAGGCGAATTTGACGCCGGTACAGCTGGATTAATTTCAGGCCCAGATAAAATTAAGACATTTTTCTCTCGCGCTGAAAGAACTATTGTCAATAATGCTGAAGGTTTAACACAATCTGGTAGCATTTGGACTGGGTTAAAGTTGAATATTCTTGCACCATCTGAGACCCAACGTGGTACAGCAAGATATGCTACGCAAGATGAAACAGATAAAGGTATTGATGCCACAACAATTGTGACTCCTGCAAAATTACATGCTAAGAAAGCCACTACAGTTGCAGAAGGTATTGTCAGAATGGCAAATACTGCTGAGACGGCAGCTGGTACTGCATATAATTTAGCAGTATCGCCTGGCAATCTAAAATATGTTGTACAATCAGAATTGACATGGGAGGCCACACCTGAACGTAGAGGTTTCATTAAACTTTCTACAGGTTCGTCAACATGGCAAGGCAACACAGTTGATGGTAATGCAAATATCGACATTGAAACTCAATTCAACAAAAATGGTATGGCTGTTTCGCCGTATGAGTTCAACCGTGTTTTAAGGAACTATTTACCTATTGGCGCTAAAGCAGTTGATTCTGATAAATTAGATGGATTGGATTCATCACAGTTTATTCGTAGAGACATTGCCCAAGTTGTTAATGGTGCATTAACACTGACACAGCCTACAACTGCAACATACATTACTGCTTCTAATGATGTATCAGTCCAAGCCCTTTTATCTGCTGATCAGATTAACATACGAAAATCTGGAACTCCTGATGATACGTCTGTTACAAAGAACGCTGGTATAAATTTGTATGGCGCTCCACAATCTGCTACAGGACGTCCGACCTATGGTATTCATTTTTCTAGTACCGGTGGCACAGACCCTAATGGGATACATGGCTATGGCGCCGGGACTTGGGGTACGTATTTTGCTCAAAGCGTCTCTAGCGCAGCTGAACAACGTGCATGGTACTTCCAGCAGATTTTTAACGGTGCAGTTAAAAACGTTGGCTCTATCACAGCACAAGGCGATGTTTGGTTTGATGGTGTTATTAACAGTGATAAAACATTCAGACTTAAAAATAGCGTCATAGCTGAAAAGGATTCAGGCGATAATCTAATTTTCGGTACGACTGATCAGCAAATGTACCTTCGTTCTAAAGCAGCAGATATAAAGGTTCAAGAAGTAGTTGGTGGAACTTCTTATCAAGTTATTACATCTAAAAACTTTGTTGATGAAGGTAACAAAACTTATGTGAGAAAGACCGGCGATTCAATGACTGGGCGCCTCAATATTTCTCAACCTATAACTGCTACTATCAACCAATCTGCTGCGACACCAAATGCAGTTCCAAATGCCAGCAATTTTGGTACATGGACTATTGATATAACTGATCCTGCAATATATAATACTATGCGCCCGTATGTTGTTGGAGTAAATGCAATCAATAAAGAGACAGGTGAAGTCTTGCCATGGTTTGATAAGTACGAGGAGTTTAATGGGCCTGGTACATTGTCGCAATTTGGATCTTCTGCTAGTAATGGTTCTGGTACATACCAAATCTGGGCGCCACGTCCGCCAGCAGATAAAGCGAATTTACCTGGGCATATTGCTGGCACAATGTGGACAAGACAGTGGAATCCTATTACAAATAAATGGGATGGCTGGGGCAGAGTATTCACAAATAACCATCCACCATTGCCTACAGACATTGGCGCTATGAGCAATAATGGTTCAGTTTTTGATTCTATGAGAATTAGAGATTGGATTCAAGTAGGTAATTTGAGAATTTATGCAGACCCATCTACAAAAACCGTTCGTTTTGATTGGATTGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7ed8e7a5a13fe58f4823477340f1c8e0659beea5cf5d1eb6bf7377a6c4213fcc
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7653
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Virulent T4-Like Acinetobacter baumannii Bacteriophages DLP1 and DLP2 Peters,D.L., Davis,C.M., Harris,G., Zhou,H., Rather,P.N., Hrapovic,S., Lam,E., Dennis,J.J. and Chen,W. 2023 36992448 GenBank