Protein

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Genbank accession
YP_008242006.1 [GenBank]
Protein name
structural protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MNDRYWFEYYDLEDNLFRCEIYPKRFFNFPYTSGNRHEITGRCYLEYSEVTNHSTILRGCGMRVDLDASSTQTLEDLWTENERQFMVELYKNEELKFFGFINPEGVFQDFVRDEWVMSLDCVGGLGYLENLSYVTPDGFPYTGLQSAMEIISNCLFRIGSFLKINVRTDVEYVGFNSQSDTENILDSVFFNADRFVRVDEDTIMDCKEVLESVLDIFNLSICQENGEWYIFKPSNIVSSSVINTFFSYNFGGSKLVPFKKEIEFNYTIGSHINNAEIHHVNENQTITATGSLGAFRINYKYGLVESIYKNQSLARDVNDVIEGWSIINPQYVDYPDSDGINIKSYRRASIGLPSTEPLGLAMETNEWIPALFGENLTFELLGTLENNAFEISFKVYLTDGVDTYWLDHEGNWLDVVNIITIEAGYAKPLFSNTQFEETYAVSANDIPIDGNIRVTVYQPGRYLPVNFPEGNDFLFRGFKVYGKSDENLVGEFHTVQRGTDPSTNIDDVKVVYNGDNETNIYYGSLYKPDEDGLTSVWKRRNFSESKAILRINAENNLRMNSKPCKVFTGDIYGYIPYLSKINIDGITGDFMVLSYNYDTYMNTISLKIKQIHSLELNDVIYEKTLDYGETVKPTIR
Physico‐chemical
properties
protein length:636 AA
molecular weight: 73189,96510 Da
isoelectric point:4,55561
aromaticity:0,13994
hydropathy:-0,33003

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_008242006.1
1 636
Domain Start End Length (AA) Confidence
N-terminal 1 291 291 0,8248
Central domain 292 514 224 0,6243
C-terminal 515 636 121 0,3332
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-291
Central
292-514
C-terminal
515-636

Taxonomy

  Name Taxonomy ID Lineage
Phage Cellulophaga phage phi10:1
[NCBI] 		1327981 Uroviricota > Caudoviricetes > Assiduviridae > Cebadecemvirus phi10una >
Host Cellulophaga baltica
[NCBI] 		76594 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008242006.1 [NCBI]
Genbank nucleotide accession
NC_021802 [NCBI]
CDS location
range 39019 -> 40929
strand +
CDS
ATGAACGATAGATATTGGTTTGAGTATTACGACTTGGAAGATAATCTATTTCGTTGTGAAATATACCCTAAAAGATTCTTTAATTTTCCGTACACATCAGGTAATAGACACGAAATAACAGGGCGTTGTTATCTTGAATATTCAGAAGTAACAAATCATTCTACAATCTTAAGAGGTTGTGGCATGCGTGTTGATTTGGATGCATCATCCACACAAACATTAGAGGACTTATGGACTGAAAACGAAAGGCAATTCATGGTTGAACTGTATAAAAATGAAGAACTTAAATTCTTTGGTTTTATCAACCCAGAAGGCGTGTTTCAGGATTTCGTTAGGGATGAGTGGGTTATGTCTTTAGATTGTGTTGGTGGTTTGGGTTATTTAGAAAACCTTAGTTATGTAACGCCAGATGGTTTCCCATATACAGGGCTACAATCGGCAATGGAAATAATATCGAATTGCTTGTTTAGAATAGGTAGTTTCCTTAAAATAAACGTTAGAACAGATGTTGAATATGTTGGATTTAATAGTCAAAGCGATACCGAAAACATATTAGATAGTGTTTTCTTTAATGCTGATAGGTTTGTGCGTGTTGATGAAGATACCATTATGGATTGCAAAGAGGTTTTAGAATCTGTTTTAGATATATTCAACCTGTCAATATGTCAAGAGAATGGAGAATGGTACATATTCAAACCTTCTAATATAGTTTCTAGTAGTGTTATTAATACATTCTTTTCTTATAATTTTGGAGGTAGTAAGTTAGTTCCATTTAAGAAAGAAATTGAATTTAATTACACTATAGGCAGTCATATTAATAACGCTGAAATACATCACGTAAACGAAAACCAGACAATAACAGCTACAGGATCATTAGGAGCTTTTAGAATCAATTATAAATATGGTTTAGTAGAATCTATTTACAAGAATCAATCACTAGCTAGAGATGTTAATGATGTCATTGAGGGTTGGTCTATTATTAATCCGCAATATGTAGACTATCCAGATAGTGACGGTATAAATATTAAATCTTACAGAAGGGCGTCAATAGGATTGCCATCTACAGAGCCTTTAGGTTTAGCAATGGAAACCAACGAATGGATTCCTGCCTTATTTGGCGAAAATCTAACCTTTGAATTATTAGGTACATTAGAAAATAATGCGTTTGAAATATCATTTAAGGTTTATTTAACTGATGGAGTTGATACATATTGGTTAGACCATGAAGGTAATTGGTTGGATGTTGTAAATATTATAACAATAGAAGCTGGTTACGCAAAGCCTTTATTCTCAAACACTCAATTTGAAGAAACTTATGCGGTTTCAGCAAATGACATTCCTATAGATGGTAATATAAGAGTAACAGTATATCAACCAGGTAGATACTTACCTGTGAACTTTCCAGAAGGAAACGACTTTCTATTTAGAGGGTTTAAGGTTTACGGTAAATCAGATGAGAATTTAGTTGGTGAATTTCACACAGTACAAAGAGGCACAGACCCAAGTACAAACATAGATGATGTAAAAGTAGTTTACAATGGTGACAATGAAACCAACATTTATTATGGTTCACTATACAAACCTGATGAGGATGGATTAACATCCGTTTGGAAGAGAAGAAACTTTTCGGAGTCGAAAGCGATACTAAGAATCAATGCAGAAAACAACTTAAGGATGAATTCAAAGCCTTGCAAAGTGTTTACTGGAGATATTTATGGCTATATTCCTTATTTATCAAAAATAAATATAGATGGAATAACTGGTGATTTTATGGTTTTGTCGTATAATTATGATACATACATGAATACTATATCTTTGAAAATCAAACAAATACATTCTTTAGAGCTTAATGATGTGATATATGAAAAGACTTTAGATTATGGTGAAACAGTAAAACCTACAATTAGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
75593633aa549529fabdb638edb507248d1111b2d776e2d010e70f5a67ebfaa0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7080
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50