Protein

View in Explore
Genbank accession
XKC19988.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,77
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAQMIKTNMRLCDMAEEIKIYGAKGGSQKQHQPVEQEDNLISLNKVKVLLAVADGEVDHNFSMKDLYLADVPVQNQDGSYNYEGVRAEFRAGTQYQDYIAGLDGANSEIQASREITNDTPYIIAVNNTQLSAIRVKLYWPRLVKQESNGDLNGTTCEYAIDLSVNGGAYQEYTRGVANGKTTTGYDRSIRVNLPAEFDSALVRIRKITADSTSSTLVNGMQITTYQEVIDAKFRYPLTALVYVEFGSDLFPNGIPTISIKKRWKLIQVPTNYDPETRTYSGTWNGLFKMAWSNNPAWVLYDLVTNRRYGLDQRELGVEIDKWGLYEAAQFCDQMVPDGKGGMEPRYLCDMVVQNKVEAYTLIRDICSIFRGLTFYDGEKIGIVVDKPRNPSYIFTNDNVVNGLFSRTFASDKSLYTTANVQFDDVENNYQQDVEPVFELEATRRFGFNPVDLTAIGCTRRSEANRRGRWLLKTNLRSETISFTTGLEGMIPMIGEVIAVNDAAWSSNYQLNLSGRIESVQGLQVFTPFKVDAAPGDRILLNKPDGSPEARTIASVSEDGRTINLNTAFSFVAQPDTVFAIDKDNLALQQYVVTGIQKADTDGSDSFQYTITAVEYDPNKYDEIDYGVNIVDRPTSIVEPDRLSPPENLTASSYSKVVQGLSVETMVIGWDKAPYAKTYNVQWRKENGNWINVPRTASTEVDIEGIYAGIYDVRVRSVSDTENVSAWSGIVTVSLTGKIGSPSAPTVITASTDEVFGIRVKWGFPEGSGDTAYTELQQVPDNGDGTYNPDNASLLTLLPYPAYEYWHTPIQPGKVIWYRARLIDRIGNTSDWSDFARGMSTDDANIINDYIKVDIESSEGFKYLEQNAIQKNQDIQNQAEAIIENALANDTDVRRMTKENGKRKAEYVQAVNLIADETQARVEALTQLKAQIDDEVVASITEVQTALATETEARTTADTALSARLGDNEAALSQKLDAFSNATSTGVQYGISLGLKYNGQTYSSGMSMELVGTGGNVRSQFIFDANRFAISNGIGSGSGQWQLPFVVENGNVIIQSAVIGDGSISNAKIGNFIQSNNYVAGTTGWRIDKSGSAELSNATVRGNLYANNGNFAFNGTNNTVQINNNGITVNLPNGGRVVVGVW
Physico‐chemical
properties
protein length:1141 AA
molecular weight: 125927,77120 Da
isoelectric point:4,72806
aromaticity:0,09290
hydropathy:-0,36126

Domains

Domains [InterPro]
DC_0014
STR
1–1141
DC_0014
IPR053171
Unmapped
19–896
IPR053171 Coil IPR015406
IPR055385
ATT
106–231
IPR055385 IPR032876 IPR036116 Coil
IPR013783
STR
643–735
IPR013783
IPR003961
STR
644–738
IPR003961
XKC19988.1
1 1141
Architecture
STR
ATT
STR
ATT
STR
STR 1-105 | ATT 106-231 | STR 232-355 | ATT 356-502 | STR 503-1141
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XKC19988.1
1 1141
Domain Start End Length (AA) Confidence
N-terminal 1 521 521 0,9259
Central domain 522 1073 553 0,0490
C-terminal 1074 1141 67 0,6449
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-521
Central
522-1073
C-terminal
1074-1141

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_Ec-G8
[NCBI] 		3378296 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XKC19988.1 [NCBI]
Genbank nucleotide accession
PQ433350.1 [NCBI]
CDS location
range 38 -> 3463
strand +
CDS
ATGGCACAAATGATCAAAACAAACATGAGGCTTTGTGATATGGCTGAAGAGATTAAGATTTATGGTGCCAAAGGCGGAAGCCAGAAGCAGCATCAACCAGTTGAGCAGGAAGATAACCTTATTTCACTTAACAAGGTTAAGGTGTTGCTTGCTGTAGCTGACGGAGAGGTTGACCATAACTTCTCAATGAAGGATTTATACCTTGCTGACGTTCCCGTGCAAAACCAGGATGGTAGCTACAACTACGAAGGTGTTCGCGCTGAGTTCCGCGCTGGTACGCAGTATCAGGATTATATCGCTGGCCTTGATGGTGCAAACTCAGAGATCCAGGCCTCCAGAGAAATCACGAACGACACCCCGTACATCATTGCGGTTAACAATACTCAGCTATCAGCAATTCGTGTAAAGCTATACTGGCCTAGACTGGTTAAGCAAGAAAGCAATGGGGACCTGAACGGAACAACCTGCGAGTATGCAATTGACCTTTCTGTTAATGGTGGAGCATATCAGGAATACACTCGCGGAGTTGCTAACGGCAAGACAACTACAGGTTACGACCGCAGCATTCGCGTGAACCTTCCTGCAGAGTTTGATAGCGCATTGGTTCGCATCCGTAAGATTACAGCAGATTCAACAAGTAGCACGCTGGTTAACGGAATGCAGATTACAACCTATCAGGAAGTAATAGACGCTAAATTCCGCTACCCGCTTACAGCACTTGTTTACGTTGAGTTCGGCTCTGACCTGTTCCCTAACGGAATTCCAACAATCTCAATCAAGAAGCGATGGAAGTTAATTCAGGTCCCAACGAACTATGATCCTGAGACTAGAACCTACAGCGGCACGTGGAATGGCCTGTTCAAGATGGCATGGTCAAACAACCCTGCGTGGGTTCTCTATGACTTGGTAACAAACCGCCGCTACGGCCTTGATCAGCGAGAGTTGGGTGTAGAAATTGATAAATGGGGACTGTATGAAGCTGCGCAATTCTGCGACCAGATGGTGCCTGATGGTAAGGGTGGAATGGAACCGCGATATCTATGCGACATGGTTGTACAGAACAAGGTTGAGGCCTACACACTAATTCGTGACATTTGCTCAATCTTTCGTGGACTGACTTTCTATGATGGCGAAAAGATTGGTATCGTTGTTGATAAACCTCGCAATCCATCTTACATCTTCACTAATGATAACGTTGTAAACGGATTGTTCAGCCGCACTTTTGCCAGCGATAAAAGCCTTTACACTACGGCAAACGTTCAGTTTGATGATGTGGAGAACAACTATCAGCAGGATGTTGAGCCAGTATTTGAGCTCGAGGCTACTCGCCGATTTGGTTTTAACCCGGTCGACCTAACGGCAATTGGATGTACGCGAAGAAGTGAAGCAAACAGACGCGGAAGATGGCTACTGAAAACCAACCTGAGAAGCGAAACTATCAGCTTCACTACCGGGTTGGAAGGCATGATTCCGATGATTGGTGAGGTGATTGCGGTCAATGACGCGGCATGGTCAAGCAACTATCAGTTAAACCTTTCTGGTCGCATTGAATCAGTTCAGGGATTGCAGGTTTTCACCCCGTTTAAAGTTGACGCAGCGCCGGGTGACAGAATTCTTTTGAACAAGCCTGACGGAAGTCCGGAGGCAAGAACTATTGCCAGTGTTTCGGAAGATGGTAGAACAATCAACCTTAACACTGCCTTTAGCTTCGTCGCTCAACCTGATACTGTTTTTGCAATCGATAAGGATAACCTTGCTCTTCAGCAGTACGTTGTGACCGGGATTCAAAAGGCAGATACTGACGGCTCGGATTCATTCCAGTATACGATTACCGCCGTAGAGTATGACCCGAACAAGTATGATGAGATTGACTACGGCGTTAACATCGTTGACCGCCCAACTTCAATTGTTGAGCCTGACAGATTGTCGCCACCAGAAAACCTGACCGCGTCAAGTTATAGTAAGGTTGTTCAAGGCTTATCAGTTGAGACGATGGTTATTGGATGGGATAAAGCGCCATACGCTAAAACATACAATGTTCAGTGGAGAAAAGAGAATGGCAACTGGATTAACGTACCAAGAACAGCTAGCACAGAAGTTGATATTGAAGGTATTTACGCAGGAATCTATGACGTTAGGGTTCGCAGTGTATCAGATACTGAAAACGTGTCTGCCTGGTCTGGCATTGTAACTGTATCACTAACTGGCAAGATTGGTAGCCCATCGGCACCTACGGTTATAACGGCATCAACTGATGAAGTATTTGGCATCCGTGTTAAATGGGGATTCCCTGAAGGATCTGGTGACACTGCTTACACTGAACTTCAGCAGGTTCCAGATAATGGTGATGGTACTTACAATCCTGATAACGCAAGTTTGCTGACGTTGCTTCCATACCCAGCCTATGAATACTGGCATACGCCAATTCAGCCAGGTAAGGTGATTTGGTATCGCGCAAGATTGATTGACAGAATCGGGAACACATCTGATTGGTCTGATTTCGCCAGAGGCATGAGTACTGATGACGCCAACATTATCAATGATTACATCAAGGTTGATATTGAGAGCTCAGAGGGATTCAAATATCTCGAGCAGAATGCGATTCAAAAGAATCAGGACATTCAGAATCAAGCTGAGGCAATTATCGAGAACGCATTAGCTAATGACACTGATGTGCGTCGTATGACTAAGGAGAACGGCAAACGTAAGGCCGAATATGTTCAGGCAGTGAATCTTATAGCTGATGAAACTCAGGCGCGTGTAGAAGCTCTTACGCAGCTTAAAGCGCAGATAGATGATGAAGTTGTAGCATCGATTACAGAAGTTCAGACAGCGCTAGCCACCGAGACAGAAGCAAGGACTACTGCAGACACGGCTCTATCAGCAAGATTGGGTGATAACGAGGCGGCTCTAAGCCAGAAGTTAGACGCATTCTCCAATGCGACATCTACTGGCGTGCAATACGGAATTAGTTTGGGTCTTAAATATAACGGCCAGACTTATTCATCTGGCATGAGCATGGAGCTTGTCGGCACTGGTGGAAATGTTCGTAGTCAATTCATTTTTGATGCAAACAGATTCGCAATCAGTAATGGAATTGGTTCTGGTTCTGGTCAGTGGCAACTCCCCTTCGTTGTCGAGAACGGAAACGTAATCATCCAAAGTGCAGTAATTGGTGATGGTTCAATCAGTAACGCGAAGATTGGTAACTTCATTCAGTCCAATAACTACGTAGCAGGAACCACAGGTTGGAGGATTGATAAGTCTGGAAGTGCAGAGCTAAGCAACGCCACTGTAAGAGGTAATCTTTACGCTAACAATGGTAACTTCGCATTCAACGGAACCAATAACACTGTTCAGATTAACAACAATGGAATTACGGTAAACTTACCGAACGGAGGTAGAGTTGTAGTTGGAGTGTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
beb424dd224c8430665e43e2eadce8cad198ffabb608bd6fdaa1b0143d2e9317
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7700
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50