Protein

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Genbank accession
AXC39707.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSSGCGDVLSLNDLQVAKKHQIFEAEVITGKQGGVAGGADIDYATNQVTGQTQKTLPAVLRDAGFSPASFNFTTGGTLGVNDADKAVLWPKEDGGDGNYYAWRGSLPKVIPAASTPLTTGGISDSAWVAFGDITFRAEADKKFKYSVKLSDFTTLQQLADAAVDSVLIDRDYTFSNNETVNFGGKTLTIDCKAKFIGDGMLIWEQLGEGSVVNQPHMQTQTTPYTVYRFDDNGNWVTNPSTVLASVAQRMDKGYKPSVNDLDIWANLPDNVKNQVAGATLRIMSGDNIIVENPEATFGGYLFTLCNRILVKNPRNFIAWESGITFENHQTAAWGTGNWVVGGEIKYGSGSAVLFIRNDGGDDHNGGVRDLISYRVGESGVKTYQNEIGGRSARNYRLVFDNITTIQCYYDGIDINADTGPQVERVDDYPLSQYPWFQLPTKHIIRNIITRDCMGIGAWWDGQNNIIDNIVTYEAHKEGIFDRGTNNDITNVTVIGANKDLTNLNQLTCEGGSRLRGVLIHAYTTQGYAVYAPQSEISSVSCAGSGTKKILCTYVGDVQGGNINVQHNESQMTLAMRPAMGGTTNPSLLMTADCQIATPGNEASIVKLSAIQDGVRVGEMQLNRLGFKHMSIPVASLQLPDSALEHNSSIGFFFGSDGVLRILAKKPDGTYVTYTLS
Physico‐chemical
properties
protein length:676 AA
molecular weight: 73274,17660 Da
isoelectric point:5,09911
aromaticity:0,08876
hydropathy:-0,24896

Domains

Domains [InterPro]
G3DSA:2.10.10.80
ATT
65–136
G3DSA:2.10.10.80 IPR012332
IPR040775
RBD
71–132
IPR040775 IPR011050
IPR015331
RBD
138–675
IPR015331
AXC39707.1
1 676
Architecture
ATT
STR
ATT 65-136 | STR 137-675 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXC39707.1
1 676
Domain Start End Length (AA) Confidence
N-terminal 1 155 155 0,9927
Central domain 156 561 407 0,9900
C-terminal 562 676 114 0,8748
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-155
Central
156-561
C-terminal
562-676

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage S103
[NCBI] 		2231337 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXC39707.1 [NCBI]
Genbank nucleotide accession
MH370361.1 [NCBI]
CDS location
range 23719 -> 25749
strand +
CDS
ATGTCTAGTGGTTGCGGTGATGTATTGTCACTTAACGATTTACAGGTAGCTAAAAAACACCAGATTTTCGAAGCCGAGGTGATCACCGGTAAACAAGGCGGTGTAGCAGGCGGCGCGGATATCGACTACGCCACTAACCAGGTAACCGGGCAGACGCAGAAGACGCTTCCCGCAGTCTTACGTGATGCTGGTTTCTCCCCGGCATCTTTTAACTTTACGACTGGGGGTACTCTCGGCGTAAACGACGCAGATAAAGCGGTTCTTTGGCCGAAAGAAGATGGCGGGGACGGTAACTATTACGCATGGCGTGGCTCCCTGCCGAAAGTTATCCCCGCGGCGTCTACCCCTCTAACAACCGGTGGCATTTCTGATTCGGCTTGGGTCGCGTTCGGAGATATTACCTTTCGCGCGGAAGCGGATAAGAAATTTAAATACTCCGTTAAGCTGTCCGACTTTACTACGTTACAACAATTGGCGGATGCCGCCGTTGATAGTGTTCTTATTGACCGCGATTACACTTTCAGCAATAACGAGACCGTTAACTTCGGCGGGAAGACCCTGACCATCGACTGTAAAGCGAAGTTTATTGGTGATGGCATGTTAATATGGGAGCAACTCGGCGAAGGGTCTGTTGTGAACCAGCCACACATGCAGACACAAACCACGCCGTACACGGTGTATAGATTCGACGACAACGGTAACTGGGTGACTAACCCATCAACGGTGCTGGCGTCGGTAGCCCAAAGGATGGATAAGGGGTATAAGCCAAGCGTTAACGATTTAGATATTTGGGCCAACCTCCCTGATAATGTAAAAAATCAGGTTGCTGGCGCAACTTTGCGAATAATGAGCGGCGATAATATCATCGTAGAGAACCCAGAAGCTACATTTGGTGGGTATCTGTTCACACTCTGTAATCGTATTCTCGTAAAAAATCCACGTAATTTTATTGCCTGGGAGTCTGGTATTACATTTGAGAACCATCAAACAGCCGCATGGGGTACTGGTAACTGGGTGGTCGGTGGTGAGATAAAATACGGTTCTGGTTCTGCAGTTTTATTTATCAGAAATGACGGTGGTGATGATCACAATGGAGGGGTAAGAGACCTTATATCTTATCGTGTCGGGGAGAGCGGCGTAAAAACTTACCAGAACGAAATAGGGGGTCGGTCCGCCCGAAACTACCGTCTGGTGTTCGATAACATTACGACCATACAGTGCTATTACGACGGGATAGATATAAACGCGGATACAGGCCCCCAGGTTGAGCGCGTAGATGATTACCCGCTCTCCCAATACCCCTGGTTTCAGTTGCCGACTAAACACATCATCCGCAACATAATAACGAGGGACTGCATGGGTATTGGGGCCTGGTGGGACGGCCAGAATAATATCATCGATAATATTGTGACGTACGAGGCCCATAAAGAGGGTATTTTTGATAGAGGTACTAACAACGACATCACTAACGTAACGGTTATAGGTGCAAACAAGGATTTAACTAACCTGAATCAGCTTACATGTGAGGGCGGTAGCCGGCTGCGGGGGGTGTTGATTCATGCGTATACCACACAAGGATACGCCGTATATGCACCACAATCGGAAATATCGTCTGTTTCGTGTGCGGGTTCTGGTACGAAAAAGATACTTTGTACCTATGTTGGCGATGTACAAGGCGGCAACATCAACGTCCAGCATAACGAAAGCCAGATGACCCTTGCTATGCGCCCGGCTATGGGGGGCACAACAAATCCATCATTGCTTATGACAGCAGATTGCCAAATAGCAACGCCAGGAAATGAGGCAAGTATAGTTAAGCTTTCAGCAATCCAGGATGGGGTGCGTGTGGGTGAGATGCAGCTTAACCGCTTAGGCTTTAAGCACATGAGCATACCTGTTGCGTCTTTACAATTACCAGATAGTGCTTTAGAACATAACTCATCTATAGGTTTCTTCTTCGGCAGTGATGGGGTGTTGCGAATCCTTGCCAAGAAGCCAGACGGGACTTACGTAACCTACACCTTATCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1c563792f9a66da679b10c6c885b5e8e9ed2c692b5fa37d7f8f61b3af44a27d6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7292
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50