Protein

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Genbank accession
WYW01006.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,52
Protein sequence
MTIALSNFVVTTPMTAKVVKGKDIALTVKGDEACARCADFISVNADGELDLFAPTHGAATESVHRTRTELMEAEYWSLDSAAHHWLRLAMTVKCVNKGGRVVIGQCHVEDSNNPLIKIFWDKESIKIGFREKETEEPVTTTVCRGVELGQRFTLALHITKAGSVSLNVSVDGKKYNFTEKMDPTWKDFEFNFHAGLYNQLDYSDKIPTTDCSRATIHTLDVDHDAA
Physico‐chemical
properties
protein length:226 AA
molecular weight: 25111,18540 Da
isoelectric point:5,70387
aromaticity:0,07965
hydropathy:-0,24646

Domains

Domains [InterPro]
G3DSA:2.60.120.200
STR
4–224
G3DSA:2.60.120.200
IPR014895
ENZ
4–223
IPR014895
IPR013320
STR
5–224
IPR013320
WYW01006.1
1 226
Architecture
STR
STR 4-224 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WYW01006.1
1 226
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0006
Central domain 11 209 200 0,0018
C-terminal 210 226 16 0,9939
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-226

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PpuM-Aura
[NCBI] 		3132641 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas putida KT2440 and
[NCBI] 		1481724 Heterolobosea > Eutetramitea > Lyromonadida > Psalteriomonadidae > Monopylocystis >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYW01006.1 [NCBI]
Genbank nucleotide accession
PP496437 [NCBI]
CDS location
range 64658 -> 65338
strand +
CDS
ATGACCATTGCGCTCTCGAATTTCGTTGTCACCACGCCGATGACTGCCAAGGTGGTTAAGGGTAAGGACATTGCCCTTACGGTCAAGGGTGACGAGGCATGCGCCCGTTGCGCTGATTTCATCTCGGTCAACGCCGACGGTGAACTCGACCTGTTTGCTCCGACCCATGGCGCAGCCACCGAGTCGGTACACAGAACCCGTACCGAGCTGATGGAAGCAGAGTACTGGTCGTTGGATTCTGCTGCTCACCACTGGCTTCGTCTGGCGATGACCGTCAAGTGTGTCAACAAAGGCGGCCGGGTGGTTATCGGCCAGTGCCATGTGGAAGACAGCAACAACCCGCTGATCAAGATCTTCTGGGACAAGGAGTCCATCAAGATCGGTTTCCGTGAAAAAGAAACCGAAGAGCCGGTTACTACCACGGTGTGCCGTGGTGTAGAGCTGGGCCAGCGTTTCACCTTGGCGCTGCACATCACCAAAGCGGGTAGCGTCTCGCTGAACGTGTCGGTGGACGGCAAGAAGTATAACTTCACGGAGAAGATGGATCCAACGTGGAAAGACTTCGAGTTCAACTTCCATGCCGGCCTGTACAACCAGCTGGACTACTCGGACAAGATCCCTACCACTGACTGCTCCCGTGCGACCATCCACACGCTGGACGTAGACCACGACGCAGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5fc4d8d8db4cd49664a32b797050d0c48f7a6aa7de387e206f2b8262f6b0747e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9459
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a phage collection against Pseudomonas putida Brauer,A., Rosendahl,S., Kangsep,A., Rikberg,R., Lewanczyk,A.C., Horak,R. and Tamman,H. — — GenBank