Protein

View in Explore
Genbank accession
QYW01762.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MHFRLFNKPAAFGIDQGKPRMWIDGIYEDYDAGDPYEGRVQIHGSVGLMKVEILGGNLPPNASVFIDQTTKEVVVKWLKYTPPTIKITEVPNGSFEDNSIWETIGPGTPATAEQGWSPNGKGNLTYRDQKGEYIVRGGWAPVSSRTRQIEISGKVEHGKSSKGNASCGVGLAWYDEKRNLVREDMGNIVDNGGKGNWYNTSGIYSAHDANIRFVRPIIKFNRKKQNHPIHIGQIQWDHVYEVGYNEDETLWVEVKVTDSTHNVAIHRGIIEENNIWLTSRPYPLIVTDASATDYTYTHAFLKEQVWEEGEDVSTSGFAGFSVQMKSVVMDYVFPDNSSTEIGFSLVLKEVLRDYGLSDATTTGVSMTVDSKRIAVDPGVEYTDSITEINFGATLNAI
Physico‐chemical
properties
protein length:397 AA
molecular weight: 44240,88910 Da
isoelectric point:5,22182
aromaticity:0,10327
hydropathy:-0,43652

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QYW01762.1
1 397
Domain Start End Length (AA) Confidence
N-terminal 1 209 209 0,4361
Central domain 210 386 178 0,1216
C-terminal 387 397 10 0,9819
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-209
Central
210-386
C-terminal
387-397

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage Ptah
[NCBI] 		2859657 Uroviricota > Caudoviricetes > Autographivirales > Gujervirinae > Ponderosavirus
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYW01762.1 [NCBI]
Genbank nucleotide accession
MZ326854.1 [NCBI]
CDS location
range 36340 -> 37533
strand +
CDS
ATGCACTTCCGTTTGTTCAACAAGCCCGCTGCCTTCGGCATTGACCAAGGCAAGCCGCGCATGTGGATCGACGGGATTTACGAAGACTACGACGCAGGCGATCCTTACGAGGGCCGCGTGCAGATTCACGGCTCCGTGGGTCTGATGAAGGTAGAGATTCTGGGCGGTAACCTGCCGCCCAACGCCTCTGTCTTCATTGACCAGACGACTAAGGAAGTCGTGGTCAAGTGGTTGAAGTACACCCCGCCGACCATCAAGATCACCGAGGTACCCAACGGCTCCTTCGAGGACAACTCGATCTGGGAAACCATCGGCCCCGGCACGCCTGCAACGGCGGAGCAGGGCTGGAGTCCCAACGGTAAGGGCAACCTGACGTACCGGGACCAGAAGGGCGAGTACATCGTGCGCGGTGGCTGGGCACCTGTGTCCAGTCGGACACGGCAGATCGAGATTTCGGGTAAGGTAGAGCACGGAAAGTCCTCTAAGGGGAACGCATCCTGTGGCGTTGGCCTTGCGTGGTACGACGAGAAGCGCAACCTAGTCCGCGAGGACATGGGGAACATCGTCGACAACGGTGGTAAGGGCAACTGGTACAACACCAGCGGCATCTACTCCGCACACGACGCGAACATCAGGTTCGTGCGCCCGATCATCAAGTTCAACCGCAAGAAGCAGAACCACCCGATCCACATTGGCCAGATTCAGTGGGACCATGTGTACGAGGTTGGGTACAACGAGGACGAAACCCTGTGGGTTGAGGTCAAGGTCACGGACTCCACGCATAACGTTGCGATCCATCGCGGCATTATCGAGGAGAACAACATCTGGCTGACCTCCCGACCGTATCCGTTGATCGTGACGGACGCCTCGGCTACGGACTACACGTACACCCACGCCTTCCTGAAGGAACAGGTATGGGAAGAGGGCGAGGACGTATCTACCTCGGGCTTCGCAGGGTTCTCTGTACAGATGAAGTCCGTCGTAATGGATTACGTGTTCCCTGACAACTCCTCTACCGAGATTGGTTTCAGTCTCGTTCTGAAGGAAGTCCTCCGGGATTACGGCCTGTCTGACGCCACAACCACAGGTGTATCAATGACTGTGGACTCCAAGCGGATCGCTGTTGATCCGGGCGTGGAGTACACCGACTCGATCACCGAAATTAACTTTGGAGCAACGCTCAATGCGATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b916988d950efe951cbea97ae6bedba1588b782a139519652e58765f7ff42072
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6323
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Stenotrophomonas maltophilia phage Ptah Berg,A., Tate,N., Clark,J., Le,T., Liu,M. and Burrowes,B. 2022-04-21 — GenBank