Protein

View in Explore
Genbank accession
XDJ01082.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,58
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MANISDQLAADIHNAFNKYYTDLSNQDQIFFGVGDVTITKQDGTTATVRSWNKVIGSVDTAAQRGAENNFTAVQTFRAGMKINGNVNCMADNAMIYLGKNSDLALLKKSGQGGTIAVGSGTPFKIQRTNTATVSPASTVEDILVIGTNKQVTLAGPLAAGGNIDNTSKGKMLTQAIELSFSTPYIDFHFNYSTDDFTGRIMATAADQISVQGSHWRVDRDLRVGGMADIKGWTQCGVDLSSNRTDFGSPAIGSLVSGGRIRSRMLGRGGNVDTTGAWGGFYLEEYVGTEHRIIVYMDGFGRTDAWSFRAGGTISTPKGDVLTTGSDVRLKTDFTQAPENASERIERLGVCEYRVKGETRVRRGFIAQQAETVDKVYTYQDVEQEIDGERIKVMNVDYVAIIADLVSSVQELKAQIRELKGE
Physico‐chemical
properties
protein length:421 AA
molecular weight: 45649,57470 Da
isoelectric point:5,59201
aromaticity:0,07838
hydropathy:-0,29762

Domains

Domains [InterPro]
DC_0590
STR
1–421
DC_0590
IPR030392
CHP
325–421
IPR030392
IPR030392
CHP
325–372
IPR030392 Coil
XDJ01082.1
1 421
Architecture
STR
STR 1-421
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage PMBT64
[NCBI] 		3229740 Uroviricota > Caudoviricetes >
Host Klebsiella pneumoniae subsp. pneumoniae
[NCBI] 		72407 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Klebsiella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XDJ01082.1 [NCBI]
Genbank nucleotide accession
PP926510.1 [NCBI]
CDS location
range 22771 -> 24036
strand -
CDS
ATGGCAAATATTAGCGATCAGCTCGCGGCTGATATTCACAATGCGTTTAACAAATACTACACAGACCTGTCGAACCAAGATCAGATCTTCTTCGGCGTCGGTGACGTGACAATTACGAAGCAGGACGGCACCACCGCCACTGTGCGCTCATGGAACAAGGTTATCGGCTCAGTGGACACCGCAGCGCAGCGCGGGGCGGAGAATAACTTTACCGCTGTACAGACGTTCAGAGCGGGGATGAAGATTAACGGTAACGTCAACTGTATGGCCGACAACGCCATGATCTACCTGGGCAAGAACTCAGATCTTGCGCTGCTTAAAAAGAGCGGGCAGGGTGGCACCATCGCCGTCGGCAGCGGTACGCCGTTTAAGATCCAGCGCACGAACACCGCCACCGTATCACCGGCGTCGACGGTCGAGGACATTCTTGTTATTGGCACAAACAAGCAGGTCACGCTGGCCGGGCCTCTCGCCGCCGGTGGCAATATTGACAACACGTCGAAGGGTAAAATGCTTACACAGGCGATTGAGCTGTCATTTAGCACGCCATACATCGACTTTCATTTTAACTACAGCACCGACGACTTCACCGGGCGCATTATGGCCACTGCCGCCGATCAAATTAGTGTGCAGGGTAGTCATTGGCGAGTTGACAGGGATCTTCGGGTTGGTGGCATGGCAGACATAAAAGGGTGGACGCAATGCGGAGTCGACCTTTCGTCCAACAGAACAGACTTCGGTTCACCTGCTATTGGTTCGTTGGTTTCAGGCGGGCGCATTCGATCCAGAATGCTTGGGCGCGGCGGTAACGTTGACACTACCGGGGCATGGGGCGGTTTCTATCTTGAAGAGTACGTGGGAACCGAACACAGGATCATCGTGTATATGGACGGCTTCGGGAGAACCGACGCATGGTCATTCCGCGCAGGTGGGACGATCTCCACACCTAAAGGCGACGTCCTAACTACCGGTTCAGATGTACGCCTGAAAACTGACTTCACACAAGCGCCTGAAAACGCCTCAGAGCGCATTGAACGCTTAGGGGTGTGTGAGTACCGGGTGAAGGGAGAAACGCGCGTGAGGCGTGGTTTTATAGCGCAGCAGGCGGAGACCGTAGACAAGGTTTATACCTATCAGGACGTCGAGCAGGAAATTGACGGCGAGCGCATCAAGGTGATGAACGTCGACTATGTGGCGATCATTGCTGACCTTGTGTCATCGGTGCAGGAATTGAAGGCGCAGATCAGGGAATTGAAAGGGGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dd08f408bfdb1235fcc0a5ff38287b831c24e97006a2d8a5d794a8253aaec955
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7935
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
This phage originates from the Bacteriophage catalogue of the Bacteriophage Competence Centre, Department of Microbiology und Biotechnology, Max Rubner-Institut, Kiel, Germany Sprotte,S., Brinks,E. and Hille,F. 2020-12-18 — GenBank