Protein

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Genbank accession
YP_007236806.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MALKLSNNSVSKLASSLTAGATSLAVLPGEGAKFPTLAAGDWFPLTVVKSDGSLEIMRCTARTTDTLTVSRAQEGTAALAFSAGDRVELRFTNAVFAVLAQIDGAPAFSQLTVNSQGNATNPFTVNGATNTNGAGIFLIGNGATTPNKTIRSHNGKLEIVNSSYGAVIWSLADTGSMDAAQRPTWAGFTPWDTGNFDPATKQAAGNYAKSTNNTVTFDWGTHQVGQLGLTIDTIYQGYLWHSGNFNPANYAIKSVHQDNGNINGSVWGGLLSDYLAAQLSGKQATGNYMRGITGNGFTVGWDSGSNHLNFFVDNNLVGFVVSDERAKKNIAPSAADALARVNALDFVEFDFIDSPYLPKKHVDNGVIAQQARLINPNWIDEPPADHPDAYLGLNLQYLLLDAMRAIQQLSFKVEELEAELTRKA
Physico‐chemical
properties
protein length:424 AA
molecular weight: 45229,89510 Da
isoelectric point:5,37529
aromaticity:0,09198
hydropathy:-0,15495

Domains

Domains [InterPro]
DC_1952
STR
1–345
DC_1952 Coil
G3DSA:6.20.70.20
RBD
250–279
G3DSA:6.20.70.20 IPR030392
IPR030392
CHP
322–378
IPR030392
DC_0247
RBD
327–423
DC_0247
YP_007236806.1
1 424
Architecture
STR
RBD
STR 1-345 | RBD 346-423 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage BcepMigl
[NCBI] 		2886899 Uroviricota > Caudoviricetes > Lessievirus >
Host Burkholderia cenocepacia
[NCBI] 		95486 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007236806.1 [NCBI]
Genbank nucleotide accession
NC_019917.1 [NCBI]
CDS location
range 37535 -> 38809
strand +
CDS
ATGGCACTGAAACTCTCCAACAACTCGGTAAGCAAGCTGGCTTCATCACTGACCGCCGGCGCGACTAGCCTTGCAGTTTTGCCGGGCGAAGGCGCGAAGTTTCCGACGCTCGCCGCCGGCGACTGGTTCCCGCTGACTGTAGTGAAAAGCGACGGATCGCTCGAGATCATGCGCTGCACGGCACGCACGACCGACACGTTGACCGTCTCGCGCGCTCAGGAAGGCACGGCGGCGCTCGCGTTCAGCGCAGGTGATCGCGTGGAGCTGCGATTCACCAACGCCGTATTTGCGGTGCTCGCACAGATTGATGGAGCTCCGGCATTCTCTCAGCTCACCGTGAACTCGCAGGGGAATGCTACCAATCCGTTCACCGTGAATGGCGCGACCAACACGAACGGCGCAGGCATCTTCCTCATTGGGAACGGAGCTACCACGCCCAACAAGACGATCCGTTCGCACAACGGGAAGCTTGAAATCGTCAACAGTTCGTATGGTGCTGTAATCTGGTCGCTCGCCGATACTGGCAGTATGGACGCCGCGCAGCGGCCTACGTGGGCTGGCTTTACCCCCTGGGACACTGGAAACTTCGATCCGGCAACGAAGCAGGCTGCTGGCAATTACGCAAAGTCGACGAATAACACTGTTACGTTCGATTGGGGAACCCATCAGGTCGGGCAGCTCGGCCTGACCATCGATACGATCTACCAAGGCTATCTCTGGCACTCTGGGAATTTCAATCCGGCGAACTACGCGATCAAGTCGGTCCATCAGGATAACGGCAATATCAACGGATCGGTGTGGGGCGGCCTTCTCTCGGATTATCTCGCCGCGCAGCTTTCTGGCAAGCAAGCGACCGGAAATTATATGCGAGGTATCACGGGGAATGGGTTCACTGTAGGTTGGGATAGCGGCTCCAACCACCTCAATTTCTTTGTGGACAACAACCTTGTCGGATTCGTCGTTTCTGATGAGCGCGCGAAGAAAAACATTGCACCTTCGGCTGCCGACGCTCTTGCGCGCGTGAACGCGCTCGATTTTGTCGAGTTCGATTTTATCGACAGCCCGTATCTGCCGAAGAAGCACGTCGACAACGGCGTGATCGCGCAGCAGGCGCGGCTCATCAACCCAAACTGGATCGACGAGCCGCCGGCCGACCATCCCGACGCGTATCTCGGGCTGAATCTGCAATACCTGCTGCTCGACGCAATGCGCGCGATCCAGCAGTTGAGCTTCAAAGTCGAGGAGCTCGAGGCCGAGCTCACGCGCAAGGCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
aac8748d82f5f4497131bc720338ae5b6c243fff2478ce1d364ef4a3a80181ff
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7650
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of the Bcep22-like bacteriophage BcepMigl Gill,J.J., Migl,D.M., Summer,E.J., Gonzlaez,C.F. and Young,R. 2014-02-27 — GenBank