Protein

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Genbank accession
AUR90464.1 [GenBank]
Protein name
Tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSKQFGLDGVSDHVEFGKDGNKLDMTNGHALVTNHAGDAIEVRGKDATHSSSFATKGQLDAATGADGGTVWIEYTTEPEITSLSANTYVEFDLTTGAADLMADHSTIPSGIAWNGSDARTYAVDITNGLIKPNDLNKQPHLISVEIAYANVGGSTDNDTEMKVKLVEYDGTNEKNNPTIIKTFRKAYNDSESGTTTIDFNTNASSHTNGTGKGWRLYFASNEGDGSVSIKIKSIRMKCG
Physico‐chemical
properties
protein length:239 AA
molecular weight: 25537,69880 Da
isoelectric point:5,00163
aromaticity:0,07113
hydropathy:-0,52594

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.144.O._10N.286.45.B3
[NCBI] 		1881428 No lineage information
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR90464.1 [NCBI]
Genbank nucleotide accession
MG592515.1 [NCBI]
CDS location
range 12947 -> 13666
strand +
CDS
ATGTCTAAACAATTTGGATTGGATGGTGTTAGTGACCATGTTGAGTTCGGCAAGGATGGTAACAAGCTCGATATGACAAACGGCCATGCGCTAGTCACAAACCACGCAGGAGACGCGATTGAAGTTAGGGGTAAAGATGCCACACACTCAAGTTCATTCGCCACTAAAGGCCAGCTAGACGCCGCAACAGGTGCCGATGGTGGTACGGTGTGGATTGAGTACACAACAGAGCCTGAGATAACCAGCCTAAGCGCAAACACCTATGTTGAGTTTGACCTAACAACCGGCGCGGCTGACTTAATGGCAGACCACAGCACAATTCCAAGCGGTATTGCGTGGAATGGCTCAGACGCTCGAACCTATGCTGTCGATATCACTAATGGGTTAATCAAACCTAACGACCTAAACAAACAACCCCATTTAATCAGTGTGGAAATCGCTTATGCCAATGTAGGCGGCTCAACTGACAATGACACAGAAATGAAGGTCAAGTTGGTTGAGTACGATGGCACTAACGAAAAGAACAATCCAACAATCATCAAAACCTTTCGTAAGGCTTACAATGATAGCGAGTCTGGAACTACAACGATTGACTTCAACACTAACGCATCAAGTCACACAAATGGCACAGGTAAAGGGTGGAGGTTATATTTTGCAAGTAACGAGGGTGATGGCTCAGTTAGCATTAAGATAAAATCAATTCGTATGAAATGCGGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
387c68fb8a29f1600490316efcfa2b41fee3a844508048ec00c7b1c2fc3be5cc
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8183
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank