Protein

View in Explore
Genbank accession
QZI84293.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MSLLRKNLYTPRWLFTKRVRSGGVRPDGIFFAEAAYQRRKLERIEARLSALEQK
Physico‐chemical
properties
protein length:54 AA
molecular weight: 6424,44780 Da
isoelectric point:11,23821
aromaticity:0,11111
hydropathy:-0,60185

Domains

Domains [InterPro]
G3DSA:1.20.5.100
RBD
25–54
G3DSA:1.20.5.100
Coil
Unmapped
34–54
Coil
QZI84293.1
1 54
Architecture
RBD
RBD 25-54
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoP-PM129
[NCBI] 		2865821 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI84293.1 [NCBI]
Genbank nucleotide accession
MZ234044.1 [NCBI]
CDS location
range 5959 -> 6123
strand +
CDS
ATGTCACTACTACGGAAGAACCTGTATACACCGAGGTGGTTATTCACGAAGAGGGTGAGGAGTGGGGGTGTTCGGCCTGACGGAATTTTCTTTGCTGAAGCCGCTTATCAGAGAAGAAAACTGGAAAGAATCGAAGCCAGACTTTCTGCTCTTGAACAGAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8a71ca2f62e9167df265f73500ce63ee0394ad7b40addc585f885e9c8003b767
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6114
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Naturally bred epsilon2 phages have an improved host range and effectivity in uropathogenic E. coli over their ancestor phages Saez,D., Loose,M., Mutti,M., Visram,Z., Hitzenhammer,E., Dippel,D., Tisakova,L., Schertler,S., Wittmann,J., Corsini,L. and Wagenlehner,F. 2020-05-19 — GenBank