Protein

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Genbank accession
YP_010112780.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MDTNTEPQINSFAGGLNSDDDLSVVATNLYIDARNIKISSYRGGEGRDNRHGSLMPVLGVKLAGSFAGESNKVVATGSIRDYGVVVCIDENENRLKIYSFKNAIGGTVHDLDFNNILKRSLVANAPLLPLDKGLKYPDVFDIQLNYESENNIKLYLADSIHPIMVFNISNDFLYDDLNKCLSYPEAVCKPPIFEEYVPGKIEFGVVSYCYLLYNRYGIHTGASIQCLQIPIGNYDFDSKYVKCGGKQGSISNCGVKISIQIPSNYWHLDYIKVFRVQYTQNGLMPIVSVIYDAKVDFNEQDSTDIVINDVGNDPIEHISVEELNSLQGVRIIPNSLASKDGFLFAANTKTILTTIKDFDKWDARAFRFNYLNTSTLTDVNGNNSFIIDAHGKDIEDDSVAVPPFDHDCYDGTYNNINKEASLYSANFVFDSEYRWVGGSGKNIEWRFVISSLVEDSCIKENNTRKIGTLYNYSQKENILQNYVFYIDKNFKPSIILKAEFDPGINKNTWLIKSLRRNEIYRYGIVLYDKYCQASSVKWIADIRTPNVTEEGFLLMSSNTIVNGKCYELVIRNLGIQFMVKSLPEGCTGYQIVRCARHESDIATISQGVLSSPVSNAYSRQYEGKNNEYYVTKYHMFCPTGFLTTNKFIEGYDVHNLLVGDGGDLASQCMTNIDNDKLLQFVSKEVCYQPESFKQFTKDKKYYLQKLSFLFGARGDHKFNDDLYDSPKNGGANTDYGMLIGYNDRRNFKFVIPCISNCAVELFTGPKDNGDARGTFHVNDIDVKNDIVKSSTICYLDAPYNPSYFYRTNPLSYKNKGITMIGSKIDHASIGGLGYDRPYSYALIKDCILNFDRLYNNDDLSANKRKEKSGKFIIQKAFAYIKLYEQSAGVLDFFDGNFASNDDWFGKSLINYILDFLLVDQIKWDLAFKRNFNKDNNELASSKTYTNYAISSGGALFTNMITGGICNDTNGNIFELFGNYSGGFKGDGTHAKFNKNACFGTGGKCLLLSCLYKENGTAGAFSYYYPKNGNYYDSLEEELYLTESSDFGMITKVIRPTLLGTYLTNLRLQTTPYGGYSFTNRLTNIYYGDGNYFESENKWNTVFDGDCHVETFEYTSMHKVYGAYTKNGKDELQFPNTHMITYSIPTESNIWCKFQHGWTLSSSARDNYASFIQSEPCEITEAYVQKEPEYVYNSVYSVLNTSMPFAAYDDLNPQDYNKTIDTRVYYSDLKQNDEIIDSWCKFRSSNFIDVDLEYGPITDICTFKNVLTFFLEQSFGVLSVNDRSVATDNSGQNIVLGTGGVLDRYDYYSNTYGMHKQQFCSVCTTGGLYWFDSHNNVICLFDGLSVVLLSKQGKVLNILNKYKKNDNFKVFYNNRYNEVVFNILSDDMQIVYNEMLGKFTSTLTIPFDGAILFFNGEYLVKKNDTVCVYLYDYLDESPKSTNQLLLSSYVKYVVAQLPLVTKVFDNQEIVTYENLLLQDVIRDNDDYFSKNHKYTWLTESLKIESSLEELITLRENNHRFVIPRADGLFGNRARGKVMICSIEDIKPNPAMAIQYIITKYRLSWS
Physico‐chemical
properties
protein length:1564 AA
molecular weight: 177903,08170 Da
isoelectric point:5,29617
aromaticity:0,13491
hydropathy:-0,33715

Domains

Domains [InterPro]
IPR057889
STR
8–711
IPR057889 IPR057889 DC_1659
YP_010112780.1
1 1564
Architecture
STR
STR
RBD
STR 8-711 | STR 930-1401 | RBD 1404-1564
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010112780.1
1 1564
Domain Start End Length (AA) Confidence
N-terminal 1 15 15 0,3572
Central domain 16 214 200 0,3920
C-terminal 215 1564 1349 0,4696
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-15
Central
16-214
C-terminal
215-1564

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured phage cr7_1
[NCBI] 		2772086 Uroviricota > Caudoviricetes > Crassvirales > Oafivirinae > Burzaovirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010112780.1 [NCBI]
Genbank nucleotide accession
NC_055895 [NCBI]
CDS location
range 67834 -> 72528
strand -
CDS
ATGGATACTAATACTGAACCACAAATTAATAGTTTTGCAGGAGGATTAAATAGTGATGATGATCTCTCTGTTGTTGCCACAAACTAGTATATTGATGCTAGAAATATAAAAATATCATCATATAGAGGTGGAGAAGGCAGAGATAATAGACATGGATCATTAATGCCAGTCTAGGGTGTAAAATTAGCTGGATCATTTGCTGGCGAGAGCAACAAAGTTGTTGCCACTGGTTCAATAAGAGATTACGGAGTAGTTGTTTGCATTGATGAAAATGAAAATAGACTTAAGATCTATAGTTTTAAAAACGCAATAGGCGGAACAGTGCATGACTAGGACTTCAATAATATATAGAAAAGAAGTCTTGTTGCAAATGCGCCATTATTGCCCTTAGATAAAGGGTAGAAGTATCCAGATGTATTTGATATTCAGCTTAATTATGAGAGCGAAAACAACATCAAGCTATACTTAGCAGATTCAATACATCCTATAATGGTTTTTAATATAAGCAATGATTTTTTATATGATGATCTTAACAAATGCTTATCTTATCCAGAAGCAGTTTGTAAACCACCGATATTTGAAGAGTATGTGCCAGGAAAAATAGAATTTGGCGTTGTAAGTTATTGTTATTAGCTGTACAATAGATACGGAATACATACAGGAGCATCTATACAATGTTAGCAAATACCAATTGGTAATTATGATTTCGACAGCAAATATGTAAAGTGCGGCGGTAAACAGGGTTCTATATCAAATTGTGGAGTAAAGATATCTATACAAATTCCTAGTAATTATTGGCATCTTGATTATATTAAAGTATTTAGAGTACAGTATACGCAAAACGGATAGATGCCAATAGTATCTGTAATATATGACGCTAAAGTAGACTTTAATGAACAAGATTCTACAGATATAGTTATAAATGATGTTGGTAATGATCCAATAGAACATATCAGTGTTGAAGAGTTAAATTCATTACAAGGTGTTAGAATAATACCTAATTCACTAGCATCTAAAGATGGTTTTCTGTTTGCAGCAAACACAAAGACAATATAGACTACTATTAAGGATTTCGATAAATGGGACGCTAGAGCATTTAGGTTCAATTACCTAAATACTAGTACTTTAACAGACGTTAATGGTAATAACTCATTTATAATAGATGCACACGGCAAAGACATAGAAGACGACTCTGTTGCAGTTCCTCCATTTGACCATGATTGTTATGATGGTACTTATAACAACATAAATAAAGAAGCTTCATTGTATTCTGCTAATTTTGTATTCGATTCAGAATATAGATGGGTTGGAGGATCTGGTAAAAATATAGAATGGAGATTTGTTATTTCTTCTTAGGTAGAAGATTCTTGCATAAAAGAAAACAATACAAGAAAGATAGGAACGCTATACAATTATTCTCAGAAAGAAAACATATAGCAAAATTATGTTTTTTACATTGATAAAAATTTTAAACCATCCATAATATAGAAAGCAGAATTTGATCCTGGAATAAATAAAAACACATGGTTAATAAAGTCACTTAGACGAAATGAGATTTATCGTTACGGAATTGTTTTGTATGATAAATATTGCCAAGCTTCTTCAGTTAAATGGATTGCTGATATAAGAACCCCAAATGTAACTGAAGAAGGTTTCTAGTTAATGTCGTCAAATACTATCGTTAATGGCAAGTGTTACGAACTAGTTATCAGAAATCTTGGAATACAATTTATGGTAAAAAGTTTACCAGAAGGCTGTACTGGTTACCAGATAGTTAGATGTGCTAGACATGAATCTGATATCGCTACAATATCACAAGGTGTACTTAGTTCTCCTGTATCTAATGCTTATAGTAGACAGTATGAAGGGAAAAATAATGAATATTATGTAACTAAGTATCATATGTTTTGCCCAACAGGGTTTTTAACAACAAATAAGTTTATAGAAGGCTACGATGTGCATAATTAGCTTGTTGGCGACGGAGGTGATCTTGCATCACAATGTATGACAAACATAGATAACGACAAATTATTGCAATTTGTTTCAAAGGAAGTTTGTTATCAACCAGAATCGTTTAAACAATTTACAAAAGACAAAAAATATTATTTGCAAAAATAGTCTTTTTTATTTGGAGCAAGAGGCGATCATAAATTTAATGACGACTAGTATGATTCTCCTAAGAATGGAGGTGCAAATACAGATTATGGAATGTTGATTGGTTATAACGATAGGAGAAATTTTAAGTTTGTAATACCATGCATTTCAAACTGTGCTGTAGAATTATTTACTGGACCAAAAGATAATGGTGACGCAAGGGGAACTTTCCATGTTAATGATATAGATGTTAAAAACGATATTGTAAAAAGTAGTACAATATGCTATTTAGACGCACCATATAATCCAAGTTATTTTTACAGGACTAATCCTTAGTCGTATAAAAATAAAGGTATAACAATGATTGGTTCAAAGATCGATCATGCTTCTATTGGTGGTCTTGGATATGATAGGCCATATTCCTATGCATTAATAAAAGATTGCATTTTAAATTTTGATAGACTATATAACAATGATGACTAGTCTGCTAATAAAAGAAAGGAAAAATCTGGCAAATTCATAATACAGAAGGCTTTTGCTTATATAAAATTGTACGAACAGAGTGCTGGTGTATAGGATTTTTTTGATGGTAATTTTGCATCTAATGATGATTGGTTTGGAAAATCTTAGATAAATTATATATAGGACTTTTAGTTAGTTGATCAAATAAAATGGGATTAGGCGTTCAAAAGAAACTTTAACAAAGATAATAACGAATAGGCCTCATCAAAAACGTACACTAATTATGCTATTTCTTCCGGTGGAGCGCTATTTACAAATATGATTACCGGCGGAATTTGCAATGATACTAATGGTAATATATTTGAATAGTTTGGTAATTATAGTGGAGGATTTAAAGGCGATGGAACTCATGCAAAGTTCAATAAAAATGCATGTTTTGGAACTGGTGGAAAGTGCTTATTGTTAAGTTGTTAGTATAAAGAAAATGGTACAGCTGGTGCATTTTCTTATTATTATCCTAAGAATGGTAATTATTATGATAGTCTAGAAGAAGAGCTATATTAGACAGAATCTAGTGATTTTGGTATGATCACAAAAGTAATTAGGCCAACTCTACTTGGAACATACCTAACCAATCTTAGATAGCAAACAACTCCTTATGGTGGGTATTCGTTTACAAATAGACTTACGAATATATATTACGGAGATGGTAATTACTTTGAGTCTGAAAATAAATGGAATACAGTATTTGATGGAGATTGTCACGTAGAGACATTCGAATATACATCTATGCATAAAGTGTATGGAGCTTATACAAAGAACGGAAAGGATGAATTACAATTCCCTAATACTCATATGATAACATACTCTATACCAACAGAATCAAATATATGGTGCAAATTTCAACATGGATGGACACTTAGTTCTAGCGCAAGAGACAATTACGCATCTTTTATACAGTCTGAACCGTGTGAAATAACAGAAGCTTACGTACAGAAAGAGCCTGAATACGTTTATAATTCTGTCTACAGTGTATAGAATACAAGTATGCCGTTTGCTGCATACGATGATCTTAATCCACAAGATTATAATAAAACTATAGATACAAGAGTATATTATTCTGATTTAAAACAGAATGATGAAATTATAGATAGCTGGTGTAAATTTAGAAGCTCTAATTTTATAGACGTCGATTAGGAATATGGCCCTATAACTGATATATGTACATTTAAGAATGTTCTTACATTTTTCTAGGAGCAATCATTTGGTGTACTCAGTGTTAATGACCGTAGTGTTGCTACAGACAATTCTGGACAAAACATAGTATTAGGAACTGGAGGAGTACTTGATAGATATGACTACTACAGCAATACTTATGGAATGCATAAGCAGCAATTCTGTTCAGTATGTACTACAGGTGGTTTATATTGGTTTGATAGTCATAATAATGTAATCTGCTTATTCGACGGATAGAGCGTAGTATAGCTTTCAAAACAAGGTAAAGTATAGAATATACTGAACAAGTATAAAAAGAACGATAACTTTAAGGTATTCTACAACAATAGATACAATGAAGTTGTATTCAATATTTTAAGCGATGATATGCAAATCGTATACAATGAAATGCTTGGAAAATTCACGTCAACACTAACTATTCCGTTTGATGGAGCTATATAGTTCTTTAATGGAGAATACCTTGTAAAGAAGAATGATACTGTATGTGTGTATTAGTACGATTATCTAGACGAATCGCCTAAATCAACAAATCAGTAGTTACTTTCAAGTTACGTTAAATATGTTGTTGCTCAATAGCCGTTGGTTACAAAGGTGTTTGACAATCAAGAAATTGTTACATACGAAAATCTATAGTTACAGGATGTAATACGCGACAATGATGATTATTTCTCAAAAAATCATAAATATACATGGTAGACAGAATCTTAGAAAATAGAATCTAGTCTAGAAGAGTAGATAACACTTAGAGAAAATAATCATAGATTTGTCATACCTAGGGCTGATGGATTATTTGGCAATAGAGCTAGAGGCAAGGTCATGATTTGCAGCATAGAAGATATTAAACCAAATCCAGCTATGGCAATACAATATATAATAACAAAATATAGATAGTCATGGAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e3ddd7b1653417127279cc1b3862f9a31b1c5d0a2a0c3803dd2fdc9ad38e178b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5047
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Taxonomic proposal: Crassvirales, a new order of highly abundant and diverse bacterial viruses Shkoporov,A.N., Stockdale,S.R., Guerin,E., Ross,R.P. and Hill,C. 2023-03-24 — GenBank