Protein

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Genbank accession
UTQ78077.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,53
Protein sequence
MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLKTLGGSGDLGQAPLIHLINRDENEQYYAVFTGTGIRVFDLAGNEKQVRYTTDGSTYIQTQNPRNDLRMVTVADYTFIVNRNIRVTRNTNAVNLAGFNPKKDALINVRGGQYGRTLQIMINGGVQASYQIPDGSHPSHVNNTDAQWLAEELARQCRANTPGWTFNVGQGFIHIIAPAGQQIDSLMTKDGYADQLINPVTHYAQSFSKLPPNAPDGYMVKIVGDSSKSADQYYVRYDATRKVWVETLGWNVNNQLLYETMPHALVRASDGNFEFRWIEWSPKTCGDDDTNPWPSFMDSTINDVFFFRNRLGFLSGENIILSRTSKYFNFYPASIANLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPYGIGRNVYFSSPRSSFTSIYRYYAVQDVSSVKNAEDITAHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFIYKFLYLNEELRQQSWSHWDFGENVQVLACHSINSTMYVILRNEFNTFLAKIAFTKNAIDLQGEPYRAFMDMKVRYTIPRGTYNDDSFTTSIHLPTIYGANFGRGKITVLEPDGKITVFEQPAAGWHSDPWLRLRGNLEGRTVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYEESGTFDIYVENQSSNWKYTMAGARLGSNALRAGRLNLGTGQYRFPVVGNAKFNTVSILSDETTPLNIIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:795 AA
molecular weight: 89421,12280 Da
isoelectric point:6,22946
aromaticity:0,11950
hydropathy:-0,36440

Domains

Domains [InterPro]
IPR058003
TTP
1–795
IPR058003
UTQ78077.1
1 795
Architecture
TTP
TTP 1-795
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UTQ78077.1
1 795
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9943
Central domain 141 349 210 0,2261
C-terminal 350 795 445 0,2106
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-349
C-terminal
350-795

Taxonomy

  Name Taxonomy ID Lineage
Phage Cedecea phage Yanou
[NCBI] 		2951236 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Teseptimavirus
Host Cedecea davisae
[NCBI] 		158484 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UTQ78077.1 [NCBI]
Genbank nucleotide accession
ON568193 [NCBI]
CDS location
range 24676 -> 27063
strand +
CDS
ATGGCACTCATTAGCCAATCAATCAAGAACTTGAAGGGTGGTATCAGCCAACAGCCTGACATCCTTCGTTATCCAGACCAAGGGTCACGCCAAGTTAACGGTTGGTCTTCGGAGACCGAGGGCCTCCAAAAGCGTCCACCTCTGGTTTTCCTTAAGACCCTAGGAGGAAGCGGTGACTTAGGGCAAGCACCTTTAATCCACCTGATTAACCGTGATGAGAACGAACAGTATTACGCTGTGTTCACTGGTACGGGAATCCGTGTGTTTGACCTTGCCGGAAACGAAAAGCAGGTACGCTATACCACTGATGGTTCTACGTACATACAAACGCAGAACCCTAGGAATGACCTAAGGATGGTAACGGTGGCTGACTATACGTTCATCGTAAACAGAAACATCCGTGTCACGCGAAATACCAACGCAGTGAACCTCGCAGGATTTAACCCTAAGAAGGACGCATTAATCAACGTTCGTGGTGGTCAGTATGGTCGTACCTTACAGATTATGATTAACGGTGGTGTACAAGCCTCCTATCAGATTCCTGATGGTTCACATCCATCACACGTTAATAACACGGACGCTCAGTGGTTAGCAGAAGAGTTGGCTCGACAGTGTAGAGCAAATACTCCGGGATGGACCTTCAATGTTGGGCAGGGTTTTATCCACATCATAGCACCTGCGGGTCAACAGATTGATTCCTTGATGACGAAGGATGGCTATGCTGACCAATTGATTAACCCTGTTACTCACTACGCTCAGTCATTCTCTAAGTTGCCACCTAACGCTCCTGACGGGTACATGGTGAAAATCGTAGGTGATTCTTCCAAGTCTGCTGACCAATACTACGTTCGCTATGACGCTACGCGTAAAGTCTGGGTTGAAACATTAGGCTGGAATGTTAACAATCAGCTTCTGTATGAAACGATGCCTCACGCATTGGTACGTGCTTCTGACGGTAACTTTGAGTTCAGGTGGATTGAGTGGAGTCCTAAAACCTGTGGTGATGACGACACAAACCCGTGGCCTTCCTTCATGGACTCCACAATCAACGATGTGTTCTTCTTCCGTAACCGTTTGGGTTTCCTTAGTGGAGAGAATATCATCTTGAGTAGAACCTCTAAATACTTCAACTTCTACCCAGCGTCAATCGCAAACTTAAGTGACGATGACCCTATCGACGTAGCTGTGAGTACCAACCGAATCGCAATCCTTAAGTACGCCGTTCCGTTCTCTGAGGAGTTACTCATCTGGTCCGATGAAGCACAATTTGTCCTGACTGCTTCCGGTACTCTCACGTCGAAGTCAGTTGAGTTGAACCTAACGACTCAGTTTGACGTACAGGACCGAGCGAGACCTTATGGGATTGGTCGCAATGTCTACTTTTCTAGTCCGAGGTCCAGCTTCACGTCCATCTACAGATATTACGCTGTGCAGGACGTAAGTTCCGTTAAGAACGCTGAGGACATTACAGCACACGTTCCTAACTATATCCCTAATGGTGTGTTCAGTATCTGCGGTAGTGGTACGGAAAACTTCTGTTCTGTACTATCTCATGGGGACCCAAGTAAAATCTTCATCTACAAATTCCTGTACCTGAACGAAGAGTTAAGGCAACAGTCGTGGTCTCACTGGGACTTTGGGGAAAACGTACAGGTTCTGGCTTGTCATAGCATCAACTCAACTATGTATGTGATTCTTCGCAATGAGTTCAATACGTTCCTAGCTAAAATAGCTTTTACTAAGAATGCTATTGACTTACAAGGTGAACCATATCGTGCCTTTATGGATATGAAGGTTCGCTACACGATTCCTAGAGGAACATACAACGATGACTCATTCACTACCTCTATTCATCTTCCCACCATTTATGGCGCTAACTTCGGGAGAGGCAAAATCACTGTACTCGAACCTGATGGTAAGATAACAGTGTTTGAGCAGCCTGCTGCTGGGTGGCATAGTGACCCTTGGTTGAGACTCAGAGGCAACTTAGAGGGACGAACGGTGTACATTGGGTTCAACATTAACTTCGTCTATGAGTTCTCTAAGTTTCTCATCAAGCAGACTGCCGACGATGGGTCAACCTCAACGGAAGACATTGGTCGCTTGCAGTTACGCCGAGCGTGGGTTAACTATGAGGAGTCTGGTACGTTCGACATTTATGTTGAGAACCAATCATCCAACTGGAAGTACACAATGGCTGGTGCACGATTAGGCTCTAACGCCCTGAGGGCTGGGAGATTGAACTTAGGGACAGGACAATACCGATTCCCTGTGGTTGGTAACGCCAAGTTCAATACAGTGTCCATCTTGTCTGATGAGACTACCCCACTGAACATCATTGGGTGTGGCTGGGAAGGTAACTACTTACGGAGAAGTTCCGGTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c5708e9b1af69f20f81c8566af740eb68fea45a2512a107892b5f75a87b0a0b9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3351
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Cedecea phage Yanou Jonikane,A., Dislers,A., Kazaks,A. and Zrelovs,N. — — GenBank