Protein

View in Explore
Genbank accession
YP_010686187.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect2
Probability 0,62
Protein sequence
MPVIHIQKMPGVPKETGNVPAGTNLWRWLENSGLPSDIRIALNGRIFGPDDELSISLKQNDIVNIYCQPRGAIGDLISTILKPVTKVLSFLLPKASTPSTSTGATVESPNNSLKSQTNIARNGEARPDNFGQIRAFPDLIQESLFEYIDDLKYVTEFMNFGLGKYTISSVRYAETNLGSLPGATHVIYNPGDVIGKIIEPYQFDGLDGQEVPGLNESEDTPIETATTTSVTSGDYAGGQLLIVIPKNTDFDYFMGLSLPHSVSLTINITYDSTSGPVTENIQLSGNIISAEETETGVIPDIQYFYNFTFNNLTGANIGNLTGATINNTYFQIVDNEALVVGPYVGAVESTQVWVHVQSELGPTSGTADYLIKVWAVDDNGDAIPGTEEQLADSIDNPFNQTTKTYYRTYKLTPAYGLAKYAISIERTNNSNSGNRVTLQAAHAINIRENVVYPDDTLVKVTVKATLQPTSVTERKYNALITRWTIGYNRTIGTVNYTLTPSRSFADSVLHNWLITAGQPESTIDIGRLYEIADALPDERLGYFDYTFDDEDKSIGERIQTICDAARVTVFWDDGVLSFSRDEQKSTPETVFNTRNTQADGYKMSYDMTLPGSYDGVSVQYRDPNTNKQAYVYYKVGTSGIEPGEPTKPKKFDMLYVRNLYQATDRAMLECNRLMYSRRGMEIKALADGEWVNVGDMISVVDIYDSVQQTGVIRSRSGNVFTTSEQLTAGSGLFVVITGANGNVSERLACTVTGLNTFECALPSDFELNIFDGVNVQSESRYAISTEVELDSTLWTVSQKTPGTDGTVSLTVTEYNDAMYAYTNPVA
Physico‐chemical
properties
protein length:826 AA
molecular weight: 90812,13930 Da
isoelectric point:4,53413
aromaticity:0,09443
hydropathy:-0,27688

Domains

Domains [InterPro]
DC_0118
STR
1–667
DC_0118 DC_0808
NF040662
Unmapped
348–820
NF040662
YP_010686187.1
1 826
Architecture
STR
RBD
STR 1-667 | RBD 684-825 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage VLCpiS13c
[NCBI] 		2874887 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010686187.1 [NCBI]
Genbank nucleotide accession
NC_071157 [NCBI]
CDS location
range 31919 -> 34399
strand -
CDS
ATGCCGGTTATTCACATTCAGAAGATGCCAGGAGTTCCAAAAGAGACGGGTAATGTTCCTGCTGGCACTAATCTGTGGAGATGGCTGGAGAATTCCGGCCTTCCATCTGATATCAGGATTGCACTGAATGGCCGCATTTTTGGCCCTGATGATGAATTGTCGATATCGTTAAAGCAAAACGATATTGTTAACATTTACTGCCAGCCTCGCGGCGCCATTGGCGATCTTATCAGCACGATACTCAAGCCTGTAACTAAGGTTCTTTCTTTTCTGCTGCCAAAAGCATCAACGCCATCAACCAGCACTGGCGCGACGGTTGAATCACCCAATAACAGCCTGAAATCGCAAACCAATATCGCGCGTAATGGAGAGGCAAGACCTGACAACTTCGGTCAGATAAGGGCATTCCCTGACCTGATTCAGGAATCGCTTTTTGAATACATTGACGATCTGAAGTACGTCACTGAGTTCATGAACTTTGGCCTTGGGAAATACACCATTTCATCTGTTAGATATGCAGAAACAAACCTCGGGTCTCTGCCCGGCGCCACTCATGTCATCTACAATCCAGGTGATGTGATCGGGAAAATCATTGAGCCTTACCAGTTCGACGGTCTTGATGGTCAGGAGGTTCCAGGACTGAACGAATCAGAAGATACCCCGATAGAGACAGCGACCACGACATCTGTTACTAGTGGTGATTATGCTGGCGGACAGTTGTTAATAGTCATACCAAAAAACACTGATTTCGATTATTTTATGGGGCTGTCTTTACCGCACTCTGTGTCATTAACAATAAATATTACCTACGATTCGACATCCGGGCCAGTTACTGAAAACATTCAGCTTAGTGGCAACATAATTTCAGCTGAGGAAACTGAGACAGGCGTCATTCCTGATATTCAGTATTTCTATAATTTCACCTTCAATAACCTGACAGGCGCAAATATTGGCAACCTGACAGGCGCAACCATCAACAACACTTATTTCCAGATTGTGGATAATGAGGCGCTTGTTGTTGGCCCATATGTTGGGGCTGTGGAGTCTACGCAGGTATGGGTTCACGTTCAATCGGAGCTTGGGCCTACCAGTGGCACGGCAGATTACCTGATCAAGGTATGGGCGGTTGATGATAATGGGGATGCCATCCCAGGGACTGAGGAGCAGCTCGCAGACAGTATTGACAACCCATTTAATCAGACAACAAAAACCTATTATCGCACGTATAAATTAACTCCTGCTTATGGGCTGGCTAAGTATGCCATCAGCATTGAAAGGACAAACAACTCAAACTCTGGCAACCGCGTAACGTTGCAGGCGGCGCACGCCATCAACATCCGCGAGAATGTAGTTTATCCTGATGACACCCTTGTTAAAGTGACTGTGAAGGCCACGCTTCAGCCCACATCAGTTACTGAGCGCAAATATAATGCGCTGATCACCCGCTGGACTATTGGATACAACAGAACAATTGGGACAGTTAACTATACGTTAACGCCATCAAGAAGTTTTGCAGATTCAGTGCTGCATAACTGGCTTATTACCGCTGGTCAGCCTGAAAGCACCATTGACATAGGCAGGCTCTATGAAATAGCTGATGCGCTTCCTGATGAGCGCCTTGGGTACTTTGATTATACCTTTGACGATGAGGATAAGTCCATTGGTGAACGAATTCAGACCATCTGTGATGCAGCTCGCGTAACGGTATTTTGGGATGATGGTGTTTTATCTTTTTCAAGAGATGAGCAAAAATCAACGCCTGAAACCGTGTTCAATACCAGAAACACGCAGGCCGACGGCTATAAAATGTCTTATGACATGACTTTGCCTGGGTCATATGATGGCGTAAGCGTTCAGTACCGCGACCCAAACACAAACAAACAGGCTTACGTTTATTATAAAGTTGGCACTTCTGGTATAGAGCCGGGAGAGCCAACTAAGCCGAAAAAATTCGACATGCTATATGTTCGAAACCTGTACCAGGCAACAGACCGGGCTATGCTTGAATGCAATCGTCTGATGTACTCACGCCGAGGAATGGAGATAAAGGCGCTTGCTGATGGCGAGTGGGTGAACGTTGGCGATATGATTTCCGTTGTCGACATTTATGATTCAGTACAGCAGACTGGAGTTATCCGATCAAGGTCTGGAAACGTATTTACCACCAGTGAGCAGCTCACAGCAGGAAGCGGCCTGTTTGTGGTCATCACTGGCGCCAATGGAAATGTGTCAGAGCGTCTCGCTTGCACTGTTACTGGATTGAATACATTCGAGTGCGCATTGCCATCTGATTTCGAGTTAAACATTTTTGACGGTGTTAATGTTCAGTCAGAATCAAGATATGCCATCTCAACAGAGGTTGAACTTGACTCAACGTTATGGACGGTCAGCCAGAAAACTCCAGGTACAGATGGCACAGTGTCTCTCACAGTAACTGAATACAATGACGCCATGTACGCCTACACCAACCCTGTTGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9d385b63ea39ca9e4d66c0afd556f72be69d21608fef5aaac73072436e4ce43b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2946
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genetic determinants of host tropism in Klebsiella phages Beamud,B., Garcia-Gonzalez,N., Gomez-Ortega,M., Gonzalez-Candelas,F., Domingo-Calap,P. and Sanjuan,R. — — GenBank