Protein

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Genbank accession

WJJ59510.1 [GenBank]

Protein name

hypothetical protein

RBP type

TSP

Evidence RBPdetect

Probability 0,87

Evidence RBPdetect2

Probability 0,73

Protein sequence

MSTITQFPSGNTQYRIEFDYLARTFVVVTLVNSSNPALNRVLEVGRDYRFLNPTMIEMLVDQSGFDIVRIHRQTGTDLVVDFSNGSVLTASDLTNSELQSIHIAEEGRDQTVDLAKEYADAAGISAGNAKDSEDEARRIASSIKASGLIGYIPRRSFEKGFNVTAWNEALLWEEDGDYYRWEGTLPKNVPAGSTPESSGGIGLGAWVSVGDILEQKVYIVVITGQSNAQGANSGGPNPASPHVKVWDGTTNTWGSSDYTQLPFSQSTPNGNGGNNNIALSFAHRLIDEHRNSKVYVIYDAVGGRPISDWVGSGTASIRYAAIKAKVEAALATPELVAAGKTKIDYLIWAQGEEDALTDTITVYRDKFKTLDTQFRSEAWMENHTPMFVMGMSGLHTRYQVWQGQLSYCENQNRNCIYVNSMGLKTQYDVSGTGDYTHWLGDSLWEHGYHRIWYALQERGITHRNQLAPFYGRGTGPWDGQPDAIAMFSSLVSIDSATSKFPTNSVAATGSITWGLNCAADGSYTFAGGHTVTTDNTCNYSAAWGRSISLGPGAQYSASFGRENN

Physico‐chemical properties

protein length:	564 AA
molecular weight:	61661,45240 Da
isoelectric point:	5,17277
aromaticity:	0,10461
hydropathy:	-0,36879

Domains

Domains [InterPro]

DC_0369
STR
1–562

DC_0369

IPR005604
ATT
10–113

IPR005604 G3DSA:2.10.10.80 SSF52266

IPR040775
RBD
154–211

IPR040775 IPR052940

IPR036514
STR
218–465

IPR036514

IPR005181
ENZ
219–428

IPR005181

WJJ59510.1

1 564

Architecture

ATT

STR

ATT

STR

ATT 1-113 | STR 114-150 | ATT 151-217 | STR 218-562 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0369	STR	DC_0369	1	562	Novel HMM	DC_0369	Central	Low	Positional only	69 proteins / 69 hits
IPR005604	ATT	DC_0240	10	113	InterPro cluster	Bacteriophage T7 tail fibre protein-like, N-terminal domain	Central	Medium	Text match	1326 proteins / 1328 hits
G3DSA:2.10.10.80	ATT	G3DSA:2.10.10.80	151	217	Merged direct domain	G3DSA:2.10.10.80	N-terminal	Low	Positional only	383 proteins / 383 hits
IPR040775	RBD	DC_0821	154	211	InterPro cluster	Tail spike TSP1/Gp66, N-terminal domain	Central	High	Text match	1281 proteins / 1285 hits
IPR052940	Unmapped	-	215	428	InterPro	Carbohydrate Esterase 6	-	-	-	-
SSF52266	STR	SSF52266	217	462	Merged direct domain	SSF52266	Central	Low	Positional only	227 proteins / 227 hits
IPR036514	STR	IPR036514	218	465	Merged direct domain	SGNH hydrolase superfamily	Central	Low	Positional only	180 proteins / 180 hits
IPR005181	ENZ	DC_0247	219	428	InterPro cluster	Sialate O-acetylesterase domain	Central	High	Text match	78 proteins / 79 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

WJJ59510.1

1 564

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	383	383	0,5479
Central domain	384	553	171	0,7444
C-terminal	554	564	10	0,4892

Note: Constraints were applied during segmentation.
Fixed 156 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-383

Central
384-553

C-terminal
554-564

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Salmonella phage ST63 [NCBI]	3027705	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Salmonella enterica subsp. enterica serovar Typhi [NCBI]	90370	Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Genbank protein accession

WJJ59510.1 [NCBI]

Genbank nucleotide accession

OQ860965 [NCBI]

CDS location

range 1 -> 1692
strand -

CDS

ATGTCCACGATTACACAATTCCCTTCAGGAAACACTCAGTACAGGATTGAGTTCGACTACCTAGCCAGAACGTTTGTTGTTGTTACGCTGGTGAATAGCTCTAACCCTGCCCTGAACCGTGTACTGGAAGTTGGTCGAGATTACCGATTCCTTAATCCAACGATGATTGAGATGTTGGTTGACCAATCAGGTTTTGACATCGTTCGTATTCACCGTCAGACTGGAACTGACTTAGTGGTAGACTTCAGTAATGGCTCAGTGTTGACAGCTAGTGACCTGACCAATTCAGAGCTTCAGTCTATCCATATTGCAGAAGAAGGTCGAGACCAAACTGTTGACTTAGCGAAGGAATATGCCGATGCTGCTGGTATCTCTGCTGGCAACGCTAAGGATAGCGAGGACGAAGCACGACGAATCGCTTCGAGTATCAAGGCATCTGGACTAATTGGCTATATCCCCCGTCGCTCCTTCGAGAAAGGCTTCAACGTTACAGCATGGAACGAGGCCCTGCTATGGGAAGAGGATGGTGATTATTACCGCTGGGAGGGTACGCTTCCAAAGAACGTTCCTGCTGGTTCAACTCCTGAATCATCTGGCGGTATTGGTCTGGGTGCTTGGGTTAGTGTTGGTGATATCCTTGAGCAGAAGGTTTACATAGTAGTAATCACCGGGCAGTCGAATGCTCAGGGTGCTAACTCCGGTGGGCCTAATCCAGCGTCGCCTCATGTTAAAGTATGGGATGGTACTACTAATACTTGGGGTAGTAGTGATTATACGCAATTACCTTTCTCCCAAAGTACCCCTAATGGTAATGGTGGGAATAACAACATTGCTTTGTCTTTTGCTCATCGTTTAATTGATGAACATAGGAATTCCAAAGTTTACGTTATCTACGATGCTGTTGGTGGGCGGCCTATTAGTGATTGGGTCGGTTCTGGCACTGCATCTATTCGTTACGCTGCAATCAAAGCTAAAGTAGAGGCTGCATTGGCTACACCTGAACTAGTGGCTGCTGGTAAAACTAAGATTGATTACCTGATTTGGGCGCAAGGGGAAGAAGATGCACTGACTGATACCATTACGGTTTACCGTGATAAGTTTAAAACCTTGGATACACAATTCCGTTCCGAAGCGTGGATGGAGAATCATACCCCAATGTTTGTGATGGGTATGTCTGGTCTTCATACTCGTTATCAGGTATGGCAAGGACAATTGAGTTACTGTGAGAACCAGAACCGTAACTGTATTTACGTTAACTCTATGGGACTAAAGACTCAGTATGACGTATCAGGTACAGGTGATTATACACACTGGTTGGGTGATTCACTGTGGGAGCATGGTTATCATCGTATCTGGTATGCACTCCAAGAACGAGGCATTACTCACCGTAACCAACTGGCTCCGTTCTATGGACGTGGTACTGGTCCGTGGGATGGGCAGCCTGATGCAATTGCTATGTTTAGTTCTCTGGTAAGTATTGACTCAGCAACATCTAAGTTTCCAACCAATAGTGTAGCTGCTACTGGTTCCATTACTTGGGGACTGAACTGTGCAGCAGATGGTAGCTACACCTTCGCAGGCGGTCATACTGTAACAACGGATAATACATGTAACTACTCTGCTGCATGGGGTAGGAGCATCTCACTGGGACCCGGTGCTCAGTATAGTGCAAGTTTCGGTAGGGAGAACAAC

Genome Context

Tertiary structure

PDB ID

753a72792162cf976f146fc2a1e50de3cc78589a0221e06ec28d643664abae37

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,7346

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence