Protein

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Genbank accession
ATN93550.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MEKVVALELGNPNNSKGQDVAASINSSLNILTNLQDNLNRLFFSTEEYDKGFVWEGGIPLLLKDFTDSEKARFPVEIPKEGVTFAGEEVIGKSSSYQYNASDCMYDVTFTISPEDFDDNQIDGVLFSTSSISARANAGTKGLTCWVGKNINKNNQLYIRFSMTNGSLTIYIEDKYHGKPMRVVVGTSGGWPIIWINDRFVVLDSDPNLIEYEGSHTVYGYADGFWVGNISNTSGVFSKPFHGKIHQVKVYPKRLTNSDYTDPDANTNRDFWDYLEGSHSYTEDFAFIFDTNNTTSLIRIKDTEQIRGDVSGVYKDVLDLSGNIIDKIRID
Physico‐chemical
properties
protein length:330 AA
molecular weight: 37007,66320 Da
isoelectric point:4,72942
aromaticity:0,11818
hydropathy:-0,39394

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ATN93550.1
1 330
Domain Start End Length (AA) Confidence
N-terminal 1 45 45 0,9677
Central domain 46 284 240 0,5433
C-terminal 285 330 45 0,3795
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-45
Central
46-284
C-terminal
285-330

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage J2-1_QLiu-2017
[NCBI] 		3117586 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudoalteromonas phenolica
[NCBI] 		161398 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATN93550.1 [NCBI]
Genbank nucleotide accession
MF988720 [NCBI]
CDS location
range 139606 -> 140598
strand -
CDS
ATGGAAAAAGTAGTTGCTTTAGAGTTAGGAAACCCTAATAATTCAAAAGGACAAGATGTTGCAGCATCTATTAACTCTTCTTTAAACATACTAACAAATTTACAAGATAATTTAAACAGACTCTTTTTCTCTACAGAAGAGTATGATAAAGGTTTTGTTTGGGAAGGAGGAATACCATTATTACTTAAAGATTTTACCGATTCTGAAAAAGCAAGATTTCCTGTTGAAATCCCAAAAGAAGGGGTAACTTTTGCTGGGGAAGAGGTTATAGGTAAATCCTCATCTTACCAATATAACGCTTCGGATTGTATGTATGACGTAACTTTCACGATCTCACCAGAAGATTTTGATGACAACCAAATAGATGGGGTTTTATTCTCTACTAGCAGTATCTCTGCAAGAGCAAATGCAGGAACTAAAGGCTTAACCTGTTGGGTTGGTAAGAATATAAACAAGAACAACCAACTATATATCAGATTCTCTATGACAAACGGTAGCTTAACTATTTACATAGAAGATAAGTACCACGGAAAACCTATGAGAGTGGTTGTAGGGACTAGTGGTGGTTGGCCTATAATATGGATTAATGATCGGTTTGTTGTATTAGATTCAGATCCAAATTTAATAGAATATGAAGGAAGCCATACTGTTTATGGATATGCCGACGGTTTTTGGGTAGGTAATATTTCAAACACTTCTGGTGTTTTTAGTAAGCCTTTCCACGGAAAAATACATCAAGTCAAAGTGTACCCTAAAAGACTAACTAATAGCGATTATACAGATCCAGATGCTAATACTAATCGAGACTTTTGGGATTATCTTGAGGGTAGCCATAGTTATACGGAAGATTTTGCTTTTATTTTTGACACAAACAACACCACATCTCTTATAAGAATAAAGGATACCGAGCAAATCAGAGGAGATGTTTCTGGTGTATATAAAGATGTTCTTGACTTATCAGGAAACATAATAGATAAAATAAGGATTGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a2507a64a534f1328e2724a3ac4eef452b00398b9837c6308443c74217431608
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5368
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genomic Sequence of BacteriophageJ2-1: A Novel Pseudoalteromonas phenolica Phage Isolated from the Coastal Water of Qingdao, China Liu,Q. 2018-06 — GenBank