Protein

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Genbank accession
QIG62429.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAFDTVKKTFTKEHMWIVELISGETTYRFCENRSPLPLELEAVPSLSSVSVSPAALDLEGGLGVRATASITLNDHNDYTVFSSEGARFWPRWRAENPYYQGSKVSVLSGYLVNGEYIAENFQARDYILEKWTYASGRVNISCKDPLKLTDNDRGQAPKATNAVLGGEVLVGDITITVDNSDDFIVGDYIRINSEVMQITAINSLLLDVDRGLYNTVVDSHSIDDAVQKCLYYNDTLPNIVYDIMVNYSEIDPSYINKSGWDNEAALFLPGFYETLLTEPVGANDLLKELTEQAPHYLYWDERTNKIEMVAVKQPPDSSQIITDEANIIEGTVKVTDKNDMRISRVIVNFGQIDPTKKLDEFSNYRQAYVRVDPDSEINYGTSKLKTIYSRWINNSNKAAAIRLAARIGRRFAKSPRAVTFGLDAKDSDIWTGSPVRINTADILNEITYDRYDMPVQVTSVVEKGFYQYEALEHTYGNPTEEDEEVDGNGEIVILSGEIVDINLRDIYDTLFPTVASDANVVFLFDQSCTAGGTTTNAAVKTGSWPELDTPPLIDIRGLLIGKGGDGADAVSSNATDGGLALELQDDIRFSNDGILGGGGGGGDSDQINEPGDFVGNLAGGGGAGFILGNGGTGSSSSEGEIVSEAQNGTKTEGGDGAKSAPIPSFTNNGGDLGQDGQGVSGGAAGAAIQTNGYTITYVESGAGDIRGAIL
Physico‐chemical
properties
protein length:710 AA
molecular weight: 76656,88170 Da
isoelectric point:4,36020
aromaticity:0,08451
hydropathy:-0,29014

Domains

Domains [InterPro]
DC_1555
ATT
15–470
DC_1555 IPR007932
IPR007932
RBD
555–708
IPR007932
QIG62429.1
1 710
Architecture
ATT
RBD
ATT 15-470 | RBD 495-709 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage AL
[NCBI] 		2712933 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudoalteromonas marina
[NCBI] 		267375 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG62429.1 [NCBI]
Genbank nucleotide accession
MT002875.2 [NCBI]
CDS location
range 13942 -> 16074
strand -
CDS
ATGGCTTTTGATACAGTTAAAAAAACATTCACTAAAGAACATATGTGGATTGTTGAGCTAATAAGCGGCGAAACAACATACCGATTTTGTGAAAACCGTTCACCACTGCCGTTAGAGCTTGAGGCAGTACCATCATTATCTAGCGTTAGCGTTTCACCTGCCGCTTTAGATTTAGAGGGCGGTTTAGGTGTTAGAGCTACCGCGTCAATTACATTAAATGATCACAATGATTACACTGTATTTAGTAGCGAAGGCGCAAGGTTTTGGCCAAGGTGGAGGGCTGAAAATCCATACTATCAAGGCTCAAAGGTTAGCGTTTTATCTGGCTACTTAGTTAATGGTGAATACATTGCGGAGAACTTTCAAGCCCGTGATTACATACTAGAAAAGTGGACTTACGCAAGCGGACGAGTAAACATATCATGCAAAGACCCGCTAAAGCTTACAGATAACGACAGAGGGCAAGCGCCAAAAGCAACTAACGCCGTGCTTGGTGGTGAGGTTCTAGTTGGTGATATAACCATAACTGTTGATAATTCAGATGATTTTATTGTAGGTGACTACATACGCATCAACTCAGAAGTAATGCAGATAACAGCAATTAACAGCTTGTTACTTGATGTTGATAGGGGGCTTTATAATACGGTTGTCGATAGTCACAGCATTGACGATGCGGTGCAGAAGTGCCTTTACTATAACGACACGTTACCGAATATCGTTTATGACATCATGGTCAACTACTCTGAAATTGATCCAAGCTATATAAATAAGTCAGGCTGGGATAATGAGGCGGCTTTATTTTTACCGGGCTTTTACGAAACGCTACTAACAGAACCAGTAGGTGCAAACGATTTATTAAAAGAGCTAACAGAGCAAGCGCCACATTACCTATATTGGGATGAGCGCACAAATAAAATAGAAATGGTAGCAGTTAAACAACCGCCTGACTCTAGCCAGATAATTACGGATGAGGCTAATATTATTGAGGGAACTGTAAAAGTAACCGATAAAAACGATATGAGAATCAGCCGTGTGATTGTTAACTTTGGTCAAATTGACCCAACCAAAAAGCTTGATGAGTTTTCGAATTATAGACAGGCTTATGTAAGGGTTGACCCAGATAGTGAGATTAATTATGGCACATCAAAGCTAAAAACAATCTACTCACGATGGATAAACAACAGCAATAAAGCTGCCGCAATTAGATTGGCGGCGCGCATAGGTAGGCGTTTTGCTAAATCACCTAGGGCGGTTACATTTGGTTTAGATGCTAAAGATTCTGACATTTGGACAGGCTCACCCGTTAGAATTAATACGGCTGATATACTTAACGAGATAACCTATGACCGTTACGATATGCCCGTACAGGTTACGAGTGTAGTTGAGAAAGGCTTTTATCAATATGAAGCGCTAGAGCATACATATGGAAACCCAACCGAAGAAGATGAAGAAGTAGACGGCAACGGCGAGATTGTCATATTGTCGGGTGAAATAGTAGATATTAACTTACGTGACATTTACGACACCTTATTTCCAACTGTCGCATCAGACGCTAACGTTGTGTTTTTATTCGACCAATCTTGTACGGCTGGCGGCACAACCACAAACGCAGCGGTTAAAACTGGCTCATGGCCTGAATTAGATACGCCACCATTAATAGATATTAGAGGGCTTTTAATCGGTAAAGGTGGCGATGGGGCTGACGCAGTATCTAGTAACGCAACTGATGGCGGCTTAGCCTTAGAGCTTCAGGATGATATACGCTTTAGCAATGACGGCATCTTAGGCGGTGGTGGCGGTGGCGGTGACAGCGACCAAATAAATGAGCCTGGAGACTTTGTAGGTAATTTAGCTGGCGGCGGTGGCGCTGGTTTTATTCTTGGTAATGGCGGCACAGGCTCAAGCTCGTCTGAGGGCGAGATTGTATCAGAGGCGCAAAACGGAACAAAAACAGAAGGCGGTGATGGTGCAAAATCAGCCCCTATACCTTCATTTACAAATAACGGTGGTGACTTAGGTCAAGATGGTCAAGGTGTATCAGGCGGCGCAGCAGGTGCAGCAATACAAACTAACGGTTATACTATTACTTACGTTGAATCAGGTGCAGGCGATATAAGAGGCGCAATATTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
eddb705a0ca38f860ac044113f4f279619eaa3074cbb1af1b6d3c19c9f147971
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8826
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Complete Genome Sequence of a Novel Pseudoalteromonas Phage AL from the coastal water of Qingdao, China Zhang,X. 2017-04-20 — GenBank