Protein

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Genbank accession
YP_002300372.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MSTYGIGGSMALKCVFRNITSEGVSSRWGVFGASLFKDVSIENCVLNGLDIRFHAWDINVTNSRIGEKGISLTGGGKLNIENTTAYTNVLVNFRQDYGSTWEGDIRVKGCRLVVPANTITSVLKFNPKSVDYGYKVYFGKTVLVEDLLLDYTGVTNSELAYLFDHNNQRSTGTNNVYMPARMIFKGVRVAGRSRGVRLLTTLTPLGFRSPLGNHSYGSSSESLVTNAYYRFESVDTEDIVSEPQSVTDTHMYMPVSATALYGPEDLAPTIEIVNCKYLHLQPKCARVRMIIRDSEVRAIDAYDNGPSMGIYSLHDCDIAPNLSSGSTEMYAYNMEGARVTLSGCHFYPVKYSGVENVAKYSLLYFFDITSNGLQLELKSNNNGNTLHKKLMDQITSTYSKNTLEMVMKGLDSNSMDNTKLVVRNIEKHTGAPTTGTWNVGDIIVNSKPDILSKRGWVCTTAGTPGTWQNLGEVEPEHPVSLAASTHAGANIPLDYQQTNTIVFSRIRSDYWKMYNTSTGKITVPYDGRYVVDCGFRFRMDSQNTSDGYVYQNIEINAYTGLTTQTPVLSTFAQMRDYVKYDQDQSINGSVVLNLKKGDSFYIRVYCGNKSSQIRTWESDNDSFRYNYLYINRIGPRIS
Physico‐chemical
properties
protein length:638 AA
molecular weight: 71232,44400 Da
isoelectric point:7,53153
aromaticity:0,10502
hydropathy:-0,32445

Domains

Domains [InterPro]
DC_1462
STR
115–474
DC_1462 IPR008983
DC_0477
RBD
425–636
DC_0477
IPR008983
RBD
492–609
IPR008983
IPR001073
RBD
495–610
IPR001073
YP_002300372.1
1 638
Architecture
STR
RBD
STR 115-474 | RBD 475-636 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_002300372.1
1 638
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0032
Central domain 11 417 408 0,9868
C-terminal 418 638 220 0,9684
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-417
C-terminal
418-638

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage SP01
[NCBI] 		2884427 Uroviricota > Caudoviricetes > Herelleviridae > Okubovirus > Okubovirus SPO1
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_002300372.1 [NCBI]
Genbank nucleotide accession
NC_011421 [NCBI]
CDS location
range 66283 -> 68199
strand +
CDS
TTGTCAACCTATGGTATTGGTGGTTCTATGGCTCTCAAATGTGTGTTCCGTAACATAACTTCTGAGGGAGTTAGCTCTCGCTGGGGAGTATTCGGGGCAAGTCTATTCAAGGATGTATCCATAGAAAACTGTGTTCTTAATGGTCTTGATATACGCTTTCATGCTTGGGACATTAATGTCACCAACTCTAGGATTGGTGAAAAAGGCATATCCCTGACAGGGGGAGGTAAGCTCAACATTGAGAACACTACTGCGTATACAAATGTTCTAGTAAATTTCCGTCAGGACTACGGTTCCACTTGGGAAGGTGATATTCGTGTTAAGGGGTGTAGGCTTGTAGTTCCAGCTAACACAATCACTTCAGTTCTTAAGTTCAATCCTAAGTCTGTAGACTACGGATACAAGGTGTATTTTGGTAAGACAGTCTTAGTAGAAGACTTACTGTTAGACTATACAGGAGTGACAAACTCTGAGTTAGCATACTTGTTTGACCATAATAACCAGAGGTCTACAGGAACAAACAATGTGTATATGCCAGCACGTATGATCTTCAAAGGTGTTAGGGTAGCAGGTAGGTCTAGAGGTGTTAGGCTATTAACTACCTTAACTCCTCTAGGGTTTAGATCTCCTTTAGGTAATCACTCTTACGGAAGCTCATCAGAGAGTCTTGTAACCAATGCATATTATAGGTTTGAGAGTGTTGACACAGAGGACATTGTATCTGAACCCCAGTCTGTTACGGACACTCACATGTATATGCCTGTTAGCGCTACAGCTCTTTATGGTCCAGAAGATTTAGCACCTACAATTGAGATTGTTAACTGTAAGTATCTACATCTTCAGCCTAAATGTGCTAGAGTTAGGATGATCATCCGTGATAGTGAGGTTAGGGCTATTGATGCCTATGATAATGGTCCAAGCATGGGCATATACTCATTACATGACTGTGATATAGCTCCTAACCTCAGCTCAGGGTCTACAGAGATGTATGCGTATAATATGGAGGGGGCTAGGGTTACCTTGTCAGGTTGTCACTTTTACCCAGTAAAATATTCTGGAGTTGAAAACGTGGCAAAATACAGCCTTCTGTATTTCTTTGACATCACTTCTAATGGTCTACAGTTAGAACTAAAAAGTAATAACAACGGCAACACCCTTCACAAAAAACTCATGGACCAGATAACAAGTACGTATAGCAAGAATACTTTGGAAATGGTTATGAAGGGTTTGGACTCAAACAGCATGGATAATACAAAACTGGTAGTTAGAAATATAGAAAAACATACAGGTGCCCCAACAACAGGAACTTGGAATGTTGGAGACATCATAGTGAACTCCAAGCCAGATATATTATCTAAAAGAGGGTGGGTATGTACAACTGCGGGTACTCCAGGCACTTGGCAAAATCTAGGTGAGGTAGAACCAGAACATCCTGTATCACTGGCTGCCTCGACACACGCAGGAGCTAATATACCACTAGATTATCAACAAACGAATACGATAGTTTTCAGTAGGATCAGGTCAGATTATTGGAAAATGTATAACACCTCTACAGGTAAAATAACAGTACCTTATGATGGTCGTTATGTTGTCGATTGTGGTTTTAGATTTAGGATGGATAGTCAAAATACCTCTGATGGGTATGTTTACCAAAATATAGAAATAAATGCTTACACAGGTCTAACTACACAAACACCCGTTCTATCTACTTTCGCACAAATGAGGGATTATGTTAAGTACGATCAAGATCAATCTATAAATGGGTCTGTTGTGTTAAACCTCAAGAAGGGAGACTCCTTTTATATACGGGTTTATTGCGGAAACAAGTCGTCACAGATACGGACATGGGAAAGTGATAATGACAGCTTTAGATATAACTACTTGTATATAAACAGGATAGGACCACGTATTTCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
63c42777bc6cd88a02471de1cbb62cae00dd9d0af0b8fcb73694ffb54dd3da7d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6572
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50