Protein

View in Explore
Genbank accession
XAO52570.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAGAITTDNSATSYKSDGTPIYDNATGKSARYAKKDGVYFHIKDDLRLLLYLTANTDIDIDSSMSVTVQPMQSGETITDNYLRSPRIATITGVVVSTVEGTILTQTYNKNAEAFTAIAERWRDQKRILTLVCPHKQRLQNCVITKLSMKKDSSIANGLKIVATFQEVILKTNIGKTSISASGKRASKAGTAAKKQVGNTATTTGSSPSACQGLKTAYDNGLEKLNSTQKRLLANCIDNKSFGVKGTYSKTDDTAVSDYYKRHAGNPNSEKGVGTR
Physico‐chemical
properties
protein length:275 AA
molecular weight: 29685,18920 Da
isoelectric point:9,55829
aromaticity:0,05818
hydropathy:-0,47164

Domains

Domains [InterPro]
DC_0819
ATT
1–40
DC_0819 IPR048494 DC_0796
IPR048494
ATT
56–170
IPR048494
XAO52570.1
1 275
Architecture
ATT
ATT
RBD
ATT 1-40 | ATT 56-170 | RBD 171-275
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage vEam_PM_6
[NCBI] 		3138191 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAO52570.1 [NCBI]
Genbank nucleotide accession
PP079182 [NCBI]
CDS location
range 23089 -> 23916
strand +
CDS
ATGGCTGGTGCTATCACTACAGATAATTCGGCAACGTCTTATAAGTCAGATGGCACACCTATCTATGATAACGCTACAGGTAAATCGGCTCGTTATGCGAAGAAGGATGGGGTCTATTTTCATATTAAAGATGACCTCAGACTTCTCCTTTACCTTACAGCTAACACAGATATTGATATTGACAGTTCGATGAGCGTTACAGTTCAGCCTATGCAGTCAGGTGAGACAATCACAGATAACTATCTGAGAAGTCCTCGAATTGCCACTATCACAGGTGTTGTCGTTTCAACGGTTGAAGGTACAATTCTGACTCAGACCTACAACAAAAATGCTGAAGCCTTTACAGCGATTGCTGAACGCTGGAGAGACCAGAAAAGAATCTTAACACTGGTTTGTCCTCATAAGCAAAGACTCCAAAACTGTGTAATCACCAAACTCAGCATGAAGAAGGACTCTTCTATTGCCAACGGTTTGAAGATTGTTGCAACTTTCCAAGAAGTCATCTTGAAGACCAACATTGGCAAGACATCAATCAGTGCTTCTGGTAAGAGGGCTTCCAAGGCTGGTACAGCAGCTAAGAAACAGGTTGGTAACACAGCAACCACAACGGGTTCAAGCCCAAGTGCTTGTCAGGGTCTGAAGACTGCGTATGACAATGGACTTGAAAAACTCAATTCAACTCAGAAGAGATTACTGGCAAACTGTATCGACAACAAGTCATTCGGTGTGAAAGGGACTTACTCGAAGACTGATGATACGGCTGTATCTGACTATTACAAACGTCATGCTGGAAATCCAAACTCTGAAAAAGGTGTTGGAACAAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4d507b4d9fc83dd6c3f5aa5073d08674a1b085dc3b4d5f77533d67fe68912560
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6806
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
First European Erwinia amylovora Lytic Bacteriophage Cocktails Effective in the Host: Characterization and Prospects for Fire Blight Biocontrol Biosca,E.G., Delgado Santander,R., Moran,F., Figas-Segura,A., Vazquez,R., Catala-Senent,J.F. and Alvarez,B. 2024 38534446 GenBank