Protein

View in Explore
Genbank accession
ANM47020.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,73
Protein sequence
MKNKWVRIFDDKQTQYITDIEGLRFLDYEEEGVDNRVNATEIQSVDGVLLSPSTFGPFNLKLRFFYRGRDIADYKLIKQKLRGMLFKRTPYFINHSDMPGIKYAVYCEENAITDIAHKYGEFEITFVVFKGYSESLMTTDNFSLNSDYWQFGNGLVTDPNIKYVHTKRKFQIYNGSTDTVTPIHRHQLITTMNINAPNGFTLHNKTTGDKFTYKKKIRNNDTVVLNGVYPFKNKQHCGIDTNHEYITLAEGYNDFEVLGDGVEVKEIKFTFNFVYR
Physico‐chemical
properties
protein length:276 AA
molecular weight: 32235,08230 Da
isoelectric point:7,72444
aromaticity:0,14493
hydropathy:-0,52717

Domains

Domains [InterPro]
DC_0077
STR
1–154
DC_0077
G3DSA:2.40.30.200
ATT
2–133
G3DSA:2.40.30.200 DC_0197
IPR008841
STR
16–128
IPR008841
ANM47020.1
1 276
Architecture
ATT
STR
ATT 1-133 | STR 134-276
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ANM47020.1
1 276
Domain Start End Length (AA) Confidence
N-terminal 1 195 195 0,8111
Central domain 196 265 71 0,0640
C-terminal 266 276 10 0,7862
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-195
Central
196-265
C-terminal
266-276

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB_SauS_IMEP5
[NCBI] 		1852565 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ANM47020.1 [NCBI]
Genbank nucleotide accession
KX156762.1 [NCBI]
CDS location
range 26554 -> 27384
strand -
CDS
TTGAAAAATAAATGGGTCCGTATATTTGATGATAAACAAACTCAATATATTACGGATATAGAGGGACTAAGGTTTTTAGATTACGAAGAAGAAGGCGTGGACAATAGAGTCAACGCTACAGAAATACAAAGTGTTGATGGTGTATTATTGTCGCCTTCTACGTTTGGACCTTTTAACTTAAAATTGCGTTTTTTTTATCGTGGTAGAGATATAGCAGATTATAAATTAATAAAACAAAAATTAAGGGGTATGCTGTTCAAGCGTACTCCTTATTTTATTAATCATTCTGATATGCCAGGCATAAAATACGCGGTATATTGTGAAGAAAACGCAATAACTGATATAGCACATAAATATGGGGAGTTTGAAATTACTTTTGTTGTATTCAAAGGCTATTCAGAATCACTTATGACAACGGATAACTTCTCATTAAACAGTGACTACTGGCAATTTGGTAATGGTTTAGTAACTGATCCGAATATTAAATATGTACACACAAAAAGGAAGTTTCAAATATATAATGGTTCAACTGATACGGTCACACCTATTCATAGACATCAACTAATTACAACAATGAACATCAATGCACCTAATGGCTTTACGCTACACAACAAGACGACAGGCGATAAATTCACATACAAGAAAAAGATACGTAATAATGACACAGTAGTATTAAATGGTGTATATCCATTCAAGAATAAACAACATTGTGGTATAGACACTAACCATGAATATATAACGCTTGCTGAAGGGTATAACGATTTCGAAGTATTAGGTGATGGTGTAGAAGTAAAAGAAATAAAATTCACATTCAATTTTGTGTATAGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
dc83d29156d22a2db7a2bae8149ac0d6e7118fb7b1ae9cea80b6c5fedb17a3ec
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9232
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and complete genome sequence analysis of a novel virulent Siphoviridae phage against Staphylococcus aureus isolated from dairy cows with mastitis in Xinjiang, China Zhang,X., Zhang,Q., Sun,Q., Xing,S., Gang,Q. and Tong,Y. 2017-03-15 — GenBank