Protein

View in Explore
Genbank accession
XVB82700.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,84
Protein sequence
MKQGDKTPIAIKLLQVNTSIRRDAELSEQETTATIYLSDMKTRKVIYRDEFEVKLGIVTLVINSVLPVGSYNLEIDYNGKKYPSDNSFNIVINHSATVASEDIIKLDNLEIIEGKILDRVDEALTGETIKNMVNNTINENVMDILDDGYKEQLNQEVINHFSSNIEQYRGERGLQGIQGERGQDGKNAYELAKENGYMGSLSEWIDSLKGQKGDAGEINVKDSGKIPLVLSNGAVDNKQSYNDITHYRVIEIGNIKQVIVYGNVKNLTDAISSHIGDLPSNIAPTKTIRTFGGIDLTTREVVTAQVLLTGKLVLFKQSLFKPEYPVEFNFSYFI
Physico‐chemical
properties
protein length:334 AA
molecular weight: 37303,70390 Da
isoelectric point:5,02385
aromaticity:0,07186
hydropathy:-0,34341

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Mammaliicoccus phage phi116
[NCBI] 		3414228 Viruses >
Host Mammaliicoccus sciuri
[NCBI] 		1296 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XVB82700.1 [NCBI]
Genbank nucleotide accession
PV389079 [NCBI]
CDS location
range 28906 -> 29910
strand -
CDS
ATGAAACAAGGAGACAAGACTCCTATTGCTATTAAATTACTGCAAGTAAACACTTCAATTAGACGAGATGCTGAATTAAGTGAACAAGAAACAACTGCAACTATTTATTTATCTGATATGAAAACTAGAAAAGTAATATATAGAGATGAGTTTGAAGTTAAGCTAGGAATAGTAACGTTAGTTATTAATAGTGTTTTACCTGTAGGCTCATATAATTTAGAGATTGATTACAATGGTAAGAAATACCCTTCTGATAATAGTTTTAATATTGTTATTAACCATTCTGCCACAGTTGCTTCTGAAGATATCATAAAACTCGATAATTTAGAAATTATTGAGGGTAAAATTTTAGATAGAGTAGATGAAGCCTTAACAGGTGAAACTATAAAGAATATGGTAAATAACACAATAAATGAAAATGTAATGGATATTCTAGATGATGGATATAAAGAACAACTTAATCAAGAAGTTATTAATCATTTCAGTAGTAATATAGAGCAATATAGGGGTGAGCGTGGCTTACAGGGTATTCAGGGTGAACGTGGACAAGATGGTAAGAATGCATATGAATTAGCTAAAGAAAACGGTTATATGGGTTCACTATCTGAATGGATTGATTCACTTAAAGGTCAAAAAGGAGATGCAGGTGAAATTAATGTAAAAGATAGTGGAAAAATACCTCTTGTCTTAAGTAATGGTGCAGTTGATAACAAGCAATCCTATAATGATATAACACATTACAGAGTAATTGAAATTGGTAATATAAAACAAGTGATAGTGTATGGCAACGTCAAAAATCTTACGGATGCAATTTCCTCGCATATTGGAGATTTACCTAGTAATATTGCTCCAACTAAAACCATCAGGACGTTTGGTGGTATAGATTTAACTACTAGAGAAGTAGTAACTGCACAAGTATTATTAACTGGAAAATTAGTACTTTTTAAACAAAGTTTATTTAAACCTGAATACCCAGTAGAATTTAACTTTAGCTATTTTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c5ac40d230a3ae46fb20f3381a8c0e9a845717cc649917a062134fe2c6e7d7ac
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7799
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterisation of phylogenetically distinct temperate phages from Kenyan Mammaliicoccus sciuri Cherbuin,J.D.R. 2025-12-01 — GenBank