Protein

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Genbank accession
BDR26741.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MYHSSTIRGEFDLEIVRPDGTVRQHLHFKNLITNKALEDMSSRGVPSGGWTNMFAGTGNRTPVPTDVSLVAPVANASASLNYGTRAVWDSTTGEKVHTGTGTFRAGSFQGQALAEVGIGRVVNELYSRSLIKDANGDPTTITVLVDEELRVTYTLRIAPPADSSVKITMKGVEYTLSMRDRRTFRDLSPEPSAEFGTRGSLSWTAVSAPDNNGQTKTANLSGAAGTGIIQVPAQSAQIMRIAPADANWTEGIQYLRWETPAGRELEIKLDPPLVKNSLERVDITVTHIFNRV
Physico‐chemical
properties
protein length:292 AA
molecular weight: 31686,23460 Da
isoelectric point:6,53838
aromaticity:0,06507
hydropathy:-0,31233

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage sp. LP
[NCBI] 		2972145 No lineage information
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BDR26741.1 [NCBI]
Genbank nucleotide accession
LC727700.1 [NCBI]
CDS location
range 32242 -> 33120
strand +
CDS
ATGTACCATAGCAGCACTATCCGGGGCGAGTTCGATCTGGAGATTGTGCGTCCTGACGGCACCGTCCGTCAGCACCTGCACTTCAAAAACCTGATCACCAACAAGGCCCTTGAAGACATGAGTTCCAGAGGCGTCCCGAGTGGCGGCTGGACGAACATGTTCGCCGGCACCGGCAACCGTACTCCGGTTCCCACCGACGTATCCCTCGTGGCGCCGGTAGCTAACGCCAGTGCCTCGCTGAACTACGGCACCCGCGCCGTGTGGGACTCCACCACCGGTGAGAAAGTCCACACGGGCACAGGCACCTTCAGGGCTGGCTCCTTCCAAGGCCAGGCGCTGGCGGAAGTAGGCATCGGGCGAGTTGTCAATGAGCTGTACTCCAGGTCCCTGATCAAGGACGCCAACGGCGATCCTACCACGATCACGGTGCTGGTGGACGAAGAGCTTCGCGTGACCTACACCCTGCGGATCGCCCCGCCGGCAGACAGTTCAGTCAAGATCACGATGAAGGGCGTCGAGTACACCCTGAGCATGCGTGACCGCCGCACCTTCCGCGACCTGTCGCCGGAACCTTCGGCTGAGTTCGGCACCCGTGGTAGCTTGTCCTGGACTGCGGTAAGTGCGCCGGACAACAACGGCCAGACCAAGACCGCCAACCTGAGCGGCGCTGCTGGGACCGGGATTATCCAGGTGCCTGCACAGTCTGCGCAGATCATGCGGATTGCCCCTGCCGATGCCAACTGGACGGAAGGTATCCAGTACCTCCGCTGGGAAACCCCGGCGGGCCGTGAGCTGGAGATCAAGCTGGACCCGCCTCTGGTTAAGAACAGCCTAGAGCGCGTGGACATCACCGTCACCCACATCTTCAACCGGGTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f9393b302e11ed0f570353fa8616e38b9c3d5e7d17c418aeae27b1f4414d040a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7997
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole-Genome Sequence of Pseudomonas phage LP Fujiki,J., Nakamura,T., Nakamura,K., Tamamura,K., Ichikawa,N., Ishiguro,Y. and Iwano,H. 2021-07 — GenBank