Protein

View in Explore
Genbank accession
WHM52855.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MATTPTNKPIPSEDPRDLKFNAGKIDEEVNGSADYYADRFGVQRLTNTGRNNQFQDQMTQQADDWLGQFNQQNSDFQQFLLNSGYQFLGDYENGPYTITARNQIIRYQNEFWRLNAATNPPYATTGVNSMSWATDVTHLVSVGDANLRQELSSENGSELVDYKHGNSGTLAYSLHSRLSTVLNLFDFIPAAKHDAIVNFTSTEDLSSYVQAAIDSANTMGGATIHCPAGQYYLNVKTKPNVILVGARGPSVRRAMPWAFSVSANPGSTRFRNFANDWIISSATASQSDVTSRSFGIIGIDFDAKDATNSTGGVRLRGPEICVKSCSFYGFQDQGLEASGNIGLFEDLIANECLKNRVRSDYVGTIEISGASDCQIHRLEGNAQVKGLGSITNAAPYICGIKIAGNNHYVSALMGEISETGIYISASSVHHKMWGCRADNNVGPGYLINGVMMDTCHSYNNSRTGDGLYSGFEALPGATRIMASNCLAWTDNAPVDGTGQQRLHKYGYDFAVVDYLSLRLKPWVDQCFSYGHSLGWINSPPTHGLQYTPTIGRLSVTSNATTTPNVDGVSVIAINTTSLSQITGLDGGMIGQQVDIYLNASATVTLVNSSSFLVNNLADHADKTMRVGQVYRFIKTATNIWREVGDVIRVLSGTTAARPSSTAVIGMQYFDTTLNKPIWRNANNSGWVDATGTAV
Physico‐chemical
properties
protein length:694 AA
molecular weight: 75405,98310 Da
isoelectric point:5,70552
aromaticity:0,09366
hydropathy:-0,27896

Domains

Domains [InterPro]
DC_0941
STR
50–694
DC_0941
IPR011050
STR
201–494
IPR011050
IPR012334
STR
201–623
IPR012334
WHM52855.1
1 694
Architecture
STR
STR 50-694
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WHM52855.1
1 694
Domain Start End Length (AA) Confidence
N-terminal 1 205 205 0,9942
Central domain 206 549 345 0,9922
C-terminal 550 694 144 0,9859
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-205
Central
206-549
C-terminal
550-694

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnS_SCNJ1-C
[NCBI] 		3038271 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WHM52855.1 [NCBI]
Genbank nucleotide accession
OQ718882.1 [NCBI]
CDS location
range 24736 -> 26820
strand +
CDS
ATGGCTACTACCCCAACTAACAAGCCAATTCCTTCTGAAGACCCGCGCGACCTGAAGTTTAACGCCGGGAAGATTGATGAAGAAGTTAATGGCAGCGCTGATTACTACGCCGACCGATTCGGCGTGCAGAGGCTGACGAATACCGGCAGGAATAACCAGTTTCAAGACCAGATGACTCAGCAGGCTGATGACTGGCTGGGACAGTTTAACCAACAAAACTCTGACTTTCAGCAATTCCTCTTAAACTCTGGTTATCAGTTTTTAGGAGATTATGAAAATGGACCATATACAATTACCGCTCGCAACCAGATTATTCGTTATCAGAATGAGTTCTGGCGTTTGAATGCGGCTACTAACCCACCATATGCAACCACTGGTGTTAATAGTATGTCGTGGGCCACCGATGTTACGCATCTGGTAAGTGTTGGTGATGCTAATTTGAGGCAGGAACTTTCTTCTGAAAACGGTTCTGAATTAGTAGATTACAAGCACGGTAACTCAGGTACTTTAGCTTATTCGCTACATTCAAGATTGAGTACGGTGTTGAATCTCTTTGATTTTATACCTGCGGCAAAACATGATGCTATTGTTAATTTCACCAGCACAGAAGACCTATCATCTTACGTGCAGGCGGCGATTGATTCAGCAAATACGATGGGTGGTGCAACCATACATTGCCCTGCTGGTCAATATTATTTAAATGTCAAAACAAAACCTAATGTTATATTGGTTGGCGCAAGAGGGCCCTCCGTTCGACGTGCTATGCCGTGGGCTTTTTCAGTATCGGCTAACCCTGGGTCTACGAGATTCAGAAACTTTGCTAACGACTGGATTATATCATCGGCAACCGCATCACAATCTGATGTTACTTCCCGTAGCTTTGGCATAATTGGTATAGATTTTGACGCGAAAGACGCCACCAATAGCACAGGCGGTGTGCGCCTTCGCGGCCCTGAAATATGCGTTAAGTCTTGTAGTTTTTACGGTTTTCAGGACCAGGGGCTGGAAGCAAGCGGAAACATTGGTCTTTTTGAAGACCTTATTGCTAACGAATGCCTAAAAAACCGTGTTCGTTCTGATTATGTTGGAACCATCGAGATATCTGGTGCATCAGACTGTCAGATTCACCGACTGGAAGGTAACGCACAGGTAAAAGGCCTTGGCTCAATAACGAATGCTGCGCCGTATATCTGCGGTATAAAAATAGCCGGTAATAACCATTATGTCTCTGCACTAATGGGAGAGATATCTGAAACAGGGATATATATTAGCGCTAGTTCAGTTCATCATAAAATGTGGGGATGCCGAGCGGATAACAACGTTGGCCCAGGATACCTCATTAACGGCGTAATGATGGACACATGCCATTCATATAACAACTCACGCACTGGGGATGGATTATATTCAGGTTTTGAAGCGTTACCAGGGGCAACTCGCATAATGGCTTCCAACTGCTTGGCGTGGACAGATAACGCACCGGTAGATGGTACAGGTCAGCAACGCTTACATAAATACGGATATGATTTTGCTGTTGTAGACTATCTTTCATTAAGGTTAAAGCCATGGGTTGATCAATGCTTTTCATATGGGCATTCATTAGGATGGATAAACTCTCCGCCTACGCATGGGTTACAGTACACTCCAACAATAGGTAGATTATCTGTAACTAGTAACGCTACGACAACCCCTAACGTAGATGGGGTTAGTGTCATCGCTATAAATACTACATCATTAAGTCAAATAACCGGACTAGATGGGGGTATGATAGGCCAGCAGGTAGATATTTATCTAAACGCATCAGCTACTGTTACGCTTGTTAATAGCTCATCATTTTTAGTTAACAATCTGGCAGATCATGCTGATAAAACTATGAGGGTAGGTCAGGTATACAGATTCATTAAGACGGCAACAAATATCTGGCGAGAAGTTGGAGATGTTATACGTGTCTTATCAGGGACAACCGCTGCCAGACCAAGTTCAACAGCGGTTATCGGTATGCAATATTTTGATACAACACTTAATAAGCCAATATGGCGGAATGCGAATAACTCTGGATGGGTAGATGCTACTGGCACAGCTGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3dd08e117f19e4807e7a13704602857f69055e1aa8ecacd988b471396e891208
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8162
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50