Protein

View in Explore
Genbank accession
CCI88553.1 [GenBank]
Protein name
phage tail fibers
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MTIKTKIIVQQLLNIDETTTTAGKYPKYTVILGNSISSITAGELTAAIESASSSAAAAHNSEVAAAESAANAKDSENQAAIHADASEASATQSAASAAEAAGYVDTVKGSADDAAASALEAKGYKDAASASATESANQASLSEQAKQAALAAQTAAETAATNSANSAAASASSATDSANSATEAAAKVVEAGEKVTEAAGYATNAADSAAAAKVSETNAAGSATDAAGEVVNAATEADRAKTEADRAEAAMATKLDKEDIASFVKVYKTKAEADADVANRVTDEKVLVWSQTESKYGWYKVTTAAEVNSLTLVESEQKLLSVNNIKADDAGNVQVTLPGGNPSLWLGEVTWFAYDKDSGIGYPGVLPADGREVLRADYPDVWEAIEAGLIPSVTEVEWQAGANLYFSTGDGSTTFRLPDMMQGQAFRAADKNEENAGNIHSQIPYVVTVNGISPDEATGNVEIDTSLQGTVEIEQGGTGATTKENARIALEVYSTTEVDTALTGKANTDNVYSKSEVDTALVEKADLDSVYSKSEVDTALSQAKTQADTDYVSKTENLADLSDIEVARDNLDVYSKAEIDAKPSGGGYIGQSWWHDMRSKMPDGCVASDGQEVDQVGPFADLYADVAAGNRPTCTEAEWQADPMKRGCYVLNSSTGKMRLPDRNGVQPGSIPAPPLIGDGGSKAAGSMYKGALPNVKGETNNTVDGNGYGFVLANAKQTPPFGIGPTNLLGLSGNSSVTTARALTIDLSKSSDVFKDGVTSVQPAGAVGCFVIRYAGRAQNAGSLDAMTLSARMESINADLLAKSVTTNARIGYSLISVGTPYPAVNSRTVFPNPFGNNVPVMCVCELFHATLQKWVTTPWLYGNTGNTFGATAAYSEGEGIALTIGANGYLSAKSGASQSGLSGDYFTASPMRIHVWKVTA
Physico‐chemical
properties
protein length:922 AA
molecular weight: 95339,71530 Da
isoelectric point:4,51622
aromaticity:0,06182
hydropathy:-0,24599

Domains

Domains [InterPro]
DC_0608
ATT
1–199
DC_0608 Coil DC_1919 DC_2049
DC_0608
ATT
185–487
DC_0608
CCI88553.1
1 922
Architecture
ATT
ATT
STR
ATT 1-487 | ATT 509-637 | STR 670-904 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage phiR2-01
[NCBI] 		1206557 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus R201
Host Yersinia enterocolitica
[NCBI] 		630 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CCI88553.1 [NCBI]
Genbank nucleotide accession
HE956708.2 [NCBI]
CDS location
range 85554 -> 88322
strand -
CDS
ATGACTATAAAGACAAAAATCATTGTTCAGCAATTACTAAATATTGATGAAACTACCACTACTGCTGGTAAGTATCCTAAATACACAGTAATACTTGGTAACTCAATCAGCTCTATTACTGCTGGTGAGCTAACTGCTGCAATTGAAAGTGCCTCTAGTTCAGCTGCCGCTGCTCACAATTCAGAAGTTGCTGCTGCCGAATCTGCTGCAAATGCTAAAGATTCTGAAAACCAAGCTGCTATTCATGCAGACGCCTCAGAAGCATCTGCAACCCAATCTGCTGCATCTGCTGCCGAAGCTGCTGGATATGTAGATACTGTTAAAGGTAGTGCTGACGATGCTGCTGCTTCCGCTCTAGAAGCTAAAGGGTACAAAGATGCTGCTTCCGCTTCTGCTACTGAATCTGCTAATCAGGCATCTCTATCCGAACAGGCGAAACAAGCTGCTTTAGCTGCACAAACTGCTGCTGAAACTGCTGCTACCAATTCTGCCAACTCAGCTGCTGCATCTGCTAGTTCAGCTACTGACTCTGCAAACTCTGCTACTGAAGCTGCTGCTAAAGTTGTAGAAGCCGGTGAGAAAGTAACAGAAGCTGCGGGCTACGCTACTAATGCTGCTGACTCTGCCGCAGCAGCTAAAGTTTCTGAAACTAATGCTGCTGGATCTGCTACTGATGCTGCTGGTGAAGTAGTAAATGCTGCCACTGAGGCGGATCGTGCTAAAACAGAAGCAGATCGTGCAGAAGCTGCAATGGCTACTAAATTAGATAAAGAAGACATTGCTAGTTTTGTAAAAGTATATAAGACAAAGGCTGAAGCAGATGCCGATGTTGCAAACCGAGTTACTGATGAAAAGGTTCTAGTTTGGAGTCAAACTGAATCTAAGTATGGTTGGTATAAGGTTACTACTGCTGCGGAAGTAAACTCGCTAACTCTAGTAGAGTCCGAACAAAAACTGTTATCCGTTAACAACATTAAGGCAGATGATGCTGGTAACGTACAGGTTACTCTTCCAGGTGGTAACCCTTCTTTATGGCTTGGTGAGGTTACTTGGTTTGCTTATGATAAGGATTCTGGTATTGGGTACCCTGGTGTTCTTCCTGCTGATGGTCGTGAAGTCCTTCGTGCTGACTATCCAGATGTTTGGGAAGCAATAGAAGCTGGTTTAATTCCTTCTGTAACAGAAGTTGAGTGGCAAGCTGGTGCTAACCTTTACTTCTCCACTGGTGATGGCTCCACAACCTTCCGCTTACCAGATATGATGCAGGGACAGGCGTTTAGAGCGGCGGATAAGAACGAAGAAAACGCAGGGAACATTCATTCTCAGATTCCTTACGTTGTAACGGTTAATGGTATCTCTCCAGATGAAGCTACTGGTAATGTTGAGATCGACACTTCTTTACAGGGAACTGTTGAGATTGAACAAGGGGGTACCGGTGCAACAACTAAAGAAAATGCTCGAATAGCTCTTGAAGTGTATAGTACTACAGAAGTAGATACTGCTCTAACAGGTAAAGCCAATACAGACAACGTATACTCAAAATCCGAGGTAGATACAGCACTTGTTGAGAAAGCCGATTTAGATTCTGTGTACTCTAAATCTGAGGTTGACACGGCTCTTTCTCAGGCTAAAACTCAGGCTGATACCGACTACGTATCTAAAACGGAGAATCTAGCGGATCTTAGTGACATAGAGGTAGCCCGTGATAATCTGGACGTGTATTCAAAGGCCGAGATTGACGCGAAGCCTAGCGGTGGTGGTTATATCGGCCAGTCCTGGTGGCACGACATGCGGTCAAAAATGCCTGATGGTTGCGTGGCTTCAGATGGCCAGGAAGTGGACCAGGTAGGCCCATTTGCAGACCTGTACGCTGATGTTGCTGCGGGTAATCGCCCGACGTGCACAGAAGCTGAATGGCAGGCCGACCCGATGAAAAGAGGTTGTTATGTCCTGAATTCCTCGACTGGCAAGATGCGCTTGCCTGACCGAAACGGCGTTCAACCGGGAAGTATTCCAGCACCACCTTTGATCGGTGACGGTGGTAGCAAAGCGGCTGGATCAATGTACAAGGGTGCTTTACCTAACGTTAAAGGTGAAACAAATAATACAGTGGATGGTAATGGCTATGGTTTTGTTTTAGCTAATGCGAAACAAACACCACCTTTCGGTATCGGCCCTACAAACCTACTAGGCCTTAGCGGGAACTCATCAGTTACGACAGCTAGGGCACTGACTATAGATCTAAGCAAGTCGAGTGATGTCTTCAAGGATGGCGTCACATCAGTACAGCCAGCTGGTGCTGTCGGTTGCTTCGTCATCCGTTACGCTGGTCGAGCACAGAATGCTGGTTCACTTGATGCAATGACGCTTTCCGCGCGCATGGAGTCGATAAATGCCGACCTGCTGGCGAAGAGTGTCACAACTAATGCTCGTATTGGCTATTCGCTAATTAGTGTCGGTACACCGTACCCCGCTGTAAACTCTCGAACAGTTTTTCCAAACCCATTTGGTAACAATGTACCTGTTATGTGTGTGTGTGAGCTTTTCCATGCTACGTTGCAGAAGTGGGTAACTACTCCATGGCTATATGGGAACACAGGTAACACCTTCGGTGCGACTGCCGCATACTCAGAAGGCGAGGGCATTGCCCTCACAATCGGTGCGAATGGCTATCTTTCGGCAAAGTCAGGGGCTTCGCAATCTGGCCTGTCTGGTGACTACTTCACAGCATCCCCCATGCGAATTCACGTATGGAAGGTAACAGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e1b33679f65dc66ecb53bf573e457c65c9dabb1e1bce1b3c1369615e4c4d5ac2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6283
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic, physiological and proteomic characterization of the T5-like bacteriophage phiR2-01 infecting Yersinia enterocolitia Pajunen,M.I., Happonen,L.J., Jun,J.W., Malmstrom,J., Nawaz,A., Mattinen,L. and Skurnik,M. 2021-10-28 — GenBank