Protein

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Genbank accession
YP_009201756.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,66
Protein sequence
MPAKTMVLRAAKGSPLTNAEMDANLQSVLDYMNAQLLPTTAHHLDNYDTPGNWYQGTGGSATIEQGYPIAGGTGFLRVNMFGSAAWQEYVVRTSPFRSYYRMKTGASTWGGWMQNVVITDGGQIPAVWIPPIYSATLPAGTDANSLIVPGSYTVNSDANATAALNWPFALAGTLEVSAFATGNAQVTQTYTTRNNPTGNRAPMRFFRVRFGTGGGTWGDWKQVVTDNGPAVGTVGWWPMRASVPAGQLPLDGQTVSRATYPELTAMVLAGTLPVVSEANWLADPANRGSFTVGNGTSTIRLPDYNGASSGSYGAVFRRGDGAGAGGPGAVQRDAMQNITGSVAPFFRAGGLAPSGAFILSSYDNTPPQPGTFGAVPGDSATITLNASLVARTATENRPVNVAGVWTVHAFGTVVNPGSADAAQLASDYATLNGSFQSTKSKVDALWTGTFMNLTNANGVTISGEFPGIFSAGSTRFKGAAGSAGGATYVQAVPAAAGGTAAFLCRQNESPNASFVMLGNDTTANVARLLFSRHGSGAAITDLVIQSQDQVVGTINRYGGWILGAAPSARAANTAATITYAGGGTQWGLLMAPQSLEGAAAIAFQSTAGILCGSITSNGSATAFNTSSDYRLKTVTGDADKQAGHTRIMSVRIHEYLWKADGKPDRGVLAHELAETHPNAVTGEKDAMMEMPGYEAAILPQSVDYSKLVPDLILTVQAMQAKMDAMQEELYSLKQGAA
Physico‐chemical
properties
protein length:737 AA
molecular weight: 76640,85520 Da
isoelectric point:6,10038
aromaticity:0,08684
hydropathy:-0,08426

Domains

Domains [InterPro]
DC_1909
STR
3–128
DC_1909 cd19958 SSF88874 DC_0203
cd19958
STR
38–114
cd19958 DC_1909 DC_2049 IPR030392
IPR037053
ATT
230–308
IPR037053
YP_009201756.1
1 737
Architecture
STR
ATT
STR
RBD
STR 3-229 | ATT 230-308 | STR 309-600 | RBD 601-737
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009201756.1
1 737
Domain Start End Length (AA) Confidence
N-terminal 1 442 442 0,1648
Central domain 443 641 200 0,0963
C-terminal 642 737 95 0,9988
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-442
Central
443-641
C-terminal
642-737

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage 83-24
[NCBI] 		1589747 Uroviricota > Caudoviricetes > Steinhofvirus >
Host Achromobacter xylosoxidans
[NCBI] 		85698 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009201756.1 [NCBI]
Genbank nucleotide accession
NC_028834 [NCBI]
CDS location
range 17067 -> 19280
strand +
CDS
ATGCCCGCAAAGACTATGGTATTGCGGGCTGCTAAAGGCAGCCCTCTCACCAATGCAGAGATGGACGCGAACTTGCAGTCAGTCCTTGACTACATGAACGCCCAGCTTTTGCCAACTACGGCGCATCATCTTGATAATTATGACACGCCTGGAAATTGGTACCAGGGAACTGGAGGCTCTGCCACAATTGAGCAAGGGTACCCAATCGCAGGTGGCACTGGCTTTTTACGTGTGAATATGTTTGGTTCTGCCGCTTGGCAGGAATATGTCGTTCGTACCTCACCGTTTCGCTCTTATTACCGTATGAAGACCGGGGCTTCTACCTGGGGCGGTTGGATGCAGAACGTGGTGATTACGGACGGCGGGCAAATTCCGGCCGTCTGGATTCCGCCGATCTATTCGGCGACGTTACCAGCAGGCACAGACGCAAATAGCCTGATTGTTCCTGGGTCCTACACTGTCAATTCTGACGCAAACGCAACGGCTGCGTTGAACTGGCCGTTCGCACTAGCGGGTACGCTGGAAGTGTCTGCATTTGCCACTGGTAATGCACAAGTTACGCAAACGTATACCACGCGCAATAATCCAACTGGCAACCGCGCTCCTATGCGCTTCTTCCGTGTTCGCTTTGGCACTGGTGGTGGCACCTGGGGTGACTGGAAACAAGTTGTCACTGACAACGGACCCGCCGTCGGTACTGTGGGCTGGTGGCCCATGCGCGCAAGTGTACCGGCTGGGCAATTACCTTTGGACGGCCAAACAGTATCGCGGGCTACGTATCCAGAACTCACTGCCATGGTGCTGGCTGGTACCTTACCCGTGGTCTCCGAGGCAAACTGGTTGGCCGACCCTGCGAACCGAGGCTCGTTCACTGTTGGTAATGGCACTTCGACCATCCGACTGCCAGACTATAATGGCGCATCTTCGGGTTCTTATGGTGCTGTGTTCCGACGCGGTGACGGTGCCGGTGCGGGTGGCCCCGGCGCAGTTCAACGTGACGCCATGCAGAACATCACCGGTAGCGTGGCTCCATTCTTCCGTGCTGGAGGCTTGGCACCTTCCGGGGCGTTTATTCTCTCCTCTTATGATAACACGCCACCCCAGCCTGGTACATTTGGCGCAGTCCCTGGGGACAGTGCGACTATTACGCTAAATGCTTCTTTGGTGGCACGCACCGCTACGGAAAACCGCCCTGTGAACGTGGCTGGTGTATGGACGGTACACGCTTTTGGCACGGTGGTTAACCCAGGCAGTGCGGACGCTGCCCAGCTCGCCAGTGACTACGCCACGTTGAACGGTTCGTTCCAGTCCACCAAGTCTAAGGTTGACGCGCTATGGACCGGCACGTTCATGAACCTTACCAATGCTAATGGCGTGACCATTAGCGGAGAGTTTCCTGGTATTTTCAGCGCAGGCTCCACGCGGTTTAAGGGAGCAGCGGGAAGTGCTGGTGGTGCAACGTACGTGCAAGCAGTACCAGCAGCAGCGGGCGGGACAGCTGCTTTCCTGTGCCGTCAGAACGAAAGCCCGAACGCCAGTTTTGTTATGCTTGGCAACGATACGACTGCGAATGTTGCACGCTTGCTGTTCAGTCGACACGGCTCCGGTGCTGCAATAACAGATCTGGTTATTCAAAGTCAGGACCAGGTCGTTGGAACAATCAACCGTTATGGCGGTTGGATATTAGGTGCAGCCCCTTCCGCACGGGCCGCAAACACTGCAGCCACAATCACGTACGCTGGCGGCGGTACCCAGTGGGGTCTGTTGATGGCACCTCAATCTTTGGAAGGTGCGGCCGCCATCGCGTTCCAAAGCACGGCCGGTATCCTCTGCGGCTCGATTACTTCTAACGGTAGCGCCACGGCCTTCAACACGTCCTCGGACTATCGACTGAAAACTGTTACTGGCGATGCTGACAAGCAAGCCGGTCACACTCGCATTATGAGTGTGCGAATTCACGAGTACTTGTGGAAGGCCGACGGTAAGCCCGACCGCGGTGTTTTGGCTCACGAACTTGCGGAAACGCATCCGAACGCCGTCACAGGCGAGAAGGATGCCATGATGGAAATGCCTGGCTACGAGGCAGCGATCTTGCCGCAAAGTGTGGACTACTCGAAGCTTGTACCGGACCTCATTTTGACGGTGCAAGCCATGCAGGCTAAGATGGACGCGATGCAAGAAGAGCTCTATTCTTTGAAACAAGGTGCAGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
10e8c25364e21a5569fb0ecace314370c7716f13d21354945baabc8b0650fe0c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7149
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and genome comparisons of three Achromobacter phages of the Siphoviridae family Dreiseikelmann,B., Bunk,B., Rohde,M. and Wittmann,J. 2017-03-29 — GenBank