Protein

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Genbank accession
YP_010105906.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TSP
Evidence RBPdetect2
Probability 0,54
Protein sequence
MGFGPAYGTGRGGGAVDIFTKKDGNPAIFANTGARDTYFTTNPDELAKVKSSGNAVAIGTTNQITAAYVYKGNAWQAIATNFKGDKGAPGAPGDGIDYSHLEDNQVPKWDSKTKMFVSSGVRSLEDGSISLEPASLHLGSHTISSSAENVTFTNIVTQKAYAPLWQEVQPGAKTGYIRAHDNMTRVDLETDNSTDLVNPSFIYTAPADASLFGATIEVAADATNMEIHVELDGDELWLYRIGDLAAGVHTISFMNPADFKMGNNYRVVIGSSDGSDVVLKGSSFGRPKANLQVALWRDEIVASREWLTEQEVLNGVSIAGTQLSFTTLDGTTKNITLPAGGGPSAPSNNIDPIEFTSDLAPTAGTLTAAIPMYIFKGDTESSLTLPDTMDLPAGQDILLYVKNEATSANLIVRATTGNTIDSDTDTSFTVPRGNSIIFVSDGTQDKWHSLPISVGGGGQTLNTSQIIKSIQPTASGTGLVTTYYDDSSITTTFDPWVSDINKLNDAVDTLQKQLKSKTRYYVYKGSNTPPPDIPIGARGGYYFTFTGTSVDVVLPAPSRTAAISDGTILFVDNNSTSYKVTITTTGSDTIAGTTKVDLPAESSAWYVRHGSNWQELYSGYLPESHKKLIDEIKTLISASNTFMRDVGVQGDDPNAGKVECTELEFHKCKVTQDTVVPTKGIVKFEGTTFVNPDGSKITTDIIKLVGMELVDPLDGTPPKLLLLGGGNLPTPHQTSAYGFFSPDANTPDSIDPNSLPVFRNGRVTLHKDTTDAQYAYVILPPGEGTDAERIGELGGLPSYWAKSDKIYNIGGVSRTYTVFRSPYPFREQDLTLVIYH
Physico‐chemical
properties
protein length:836 AA
molecular weight: 89570,68610 Da
isoelectric point:4,81332
aromaticity:0,08612
hydropathy:-0,26866

Domains

Domains [InterPro]
DC_1058
STR
25–824
DC_1058
Coil
Unmapped
500–520
Coil
YP_010105906.1
1 836
Architecture
STR
STR 25-824 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010105906.1
1 836
Domain Start End Length (AA) Confidence
N-terminal 1 189 189 0,9919
Central domain 190 388 200 0,1988
C-terminal 389 836 447 0,1651
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-189
Central
190-388
C-terminal
389-836

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Chester
[NCBI] 		2712961 Uroviricota > Caudoviricetes > Demerecviridae > Thalassavirus > Thalassavirus chester
Host Vibrio harveyi
[NCBI] 		669 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010105906.1 [NCBI]
Genbank nucleotide accession
NC_055830.1 [NCBI]
CDS location
range 86987 -> 89497
strand +
CDS
ATGGGATTTGGCCCAGCCTATGGTACTGGTAGGGGCGGTGGAGCAGTAGACATCTTTACTAAAAAAGATGGAAACCCTGCCATTTTCGCCAATACTGGTGCTAGAGACACATACTTTACAACAAATCCTGATGAATTAGCTAAAGTAAAATCATCAGGTAATGCAGTAGCAATAGGTACTACTAACCAAATAACAGCCGCCTACGTATATAAAGGTAACGCATGGCAAGCAATAGCAACCAACTTCAAGGGTGACAAAGGTGCACCTGGAGCACCTGGTGATGGTATTGACTACAGCCACCTAGAAGATAATCAAGTACCTAAGTGGGACTCGAAAACTAAGATGTTTGTTAGTTCCGGTGTGCGCTCCCTAGAAGATGGCTCTATCTCCCTAGAACCAGCGTCACTACACTTAGGCTCTCACACTATTTCTAGTAGTGCAGAGAACGTAACATTTACTAACATTGTTACCCAAAAAGCATACGCGCCGTTATGGCAAGAGGTACAGCCTGGGGCTAAAACAGGGTACATTAGAGCTCACGATAACATGACTAGAGTGGACTTAGAGACTGATAACAGCACAGATCTAGTTAATCCTTCATTTATTTATACTGCTCCAGCGGATGCTTCCCTGTTCGGTGCCACTATTGAAGTAGCTGCTGATGCTACTAATATGGAAATTCATGTAGAATTAGACGGGGATGAGCTGTGGCTTTACAGAATTGGAGATTTAGCTGCTGGTGTCCACACAATCTCATTTATGAACCCCGCAGACTTTAAGATGGGTAATAACTACAGAGTAGTAATAGGCAGCTCAGACGGTTCAGATGTAGTATTAAAAGGTAGCTCCTTTGGTAGACCAAAAGCAAACTTACAAGTAGCTTTATGGAGAGATGAAATTGTAGCTAGTAGAGAATGGTTGACCGAACAGGAAGTATTGAATGGGGTATCCATAGCTGGTACTCAATTAAGCTTCACTACCTTGGACGGTACTACAAAAAACATTACACTGCCAGCTGGAGGCGGCCCAAGTGCTCCAAGCAATAATATTGATCCTATAGAGTTTACTTCTGATTTAGCCCCTACAGCTGGAACCCTAACTGCGGCTATCCCAATGTATATATTTAAAGGTGATACAGAAAGTAGCTTAACATTACCAGATACTATGGATTTACCTGCTGGACAGGATATTCTATTGTATGTTAAAAATGAGGCGACCTCTGCGAACTTAATAGTTAGAGCTACTACAGGTAATACAATAGATAGTGATACTGATACATCTTTTACTGTACCTCGCGGTAATTCTATAATCTTTGTAAGTGACGGTACACAAGATAAGTGGCATAGCTTACCTATATCTGTAGGTGGTGGGGGTCAGACTCTAAACACCAGTCAAATTATAAAAAGTATACAGCCAACAGCAAGTGGTACTGGTCTAGTTACTACATACTATGACGACTCAAGTATAACTACCACATTCGATCCTTGGGTTTCGGATATTAATAAACTTAACGACGCTGTAGATACGCTACAAAAACAACTTAAATCTAAGACTAGATACTATGTGTATAAGGGAAGTAACACGCCACCGCCAGATATCCCAATTGGAGCTAGGGGCGGATACTACTTTACCTTTACAGGTACTTCAGTTGATGTGGTATTACCTGCACCAAGCAGAACAGCAGCTATATCTGATGGTACAATCCTGTTTGTTGATAACAATAGTACAAGCTATAAAGTGACTATAACAACCACTGGATCAGATACTATTGCTGGTACTACTAAGGTTGATTTACCAGCTGAATCATCAGCTTGGTATGTTAGACATGGAAGTAACTGGCAAGAACTGTACTCAGGTTACCTACCAGAGTCGCATAAGAAGCTAATAGACGAGATAAAAACTCTAATCTCAGCAAGTAATACCTTTATGCGAGATGTTGGTGTCCAAGGTGACGATCCTAATGCTGGCAAAGTAGAATGTACAGAATTAGAGTTCCATAAGTGTAAGGTAACTCAAGATACTGTAGTACCTACTAAAGGTATTGTTAAGTTTGAAGGTACTACGTTTGTAAACCCAGACGGTTCAAAGATAACTACAGATATTATTAAATTAGTAGGTATGGAGTTGGTGGATCCACTAGATGGAACACCGCCTAAATTACTACTTCTTGGGGGTGGTAACTTACCTACTCCGCACCAAACAAGTGCGTATGGTTTCTTCAGCCCAGATGCCAATACACCTGATTCTATAGATCCTAATAGTCTTCCTGTGTTTAGGAACGGCAGGGTTACACTACATAAAGATACCACCGATGCACAATATGCATATGTTATATTACCACCTGGTGAAGGTACTGATGCTGAGAGAATTGGTGAACTTGGTGGTTTACCCTCTTACTGGGCTAAGAGTGATAAAATCTATAATATTGGTGGTGTTTCTAGAACATATACTGTGTTCCGCTCTCCTTACCCATTCAGGGAACAGGACTTAACATTAGTAATATATCATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
208aff2433e61523dd39efd893cad08e30ed1f3c01e0bf6a95a7c68fe3e55f59
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6216
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50